Pseudomonas muyukensis: KSS95_19720
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Entry
KSS95_19720 CDS
T07704
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pmuy
Pseudomonas muyukensis
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuy03400
]
KSS95_19720
DNA repair and recombination proteins [BR:
pmuy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSS95_19720
Archaeal homologous recombinant proteins
KSS95_19720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QXH34360
LinkDB
All DBs
Position
4488028..4489266
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLDWLLGQLRLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNARGKVCAWCLALPFLRPAEVTGPALGDDYLKGITQVHEQLIGAAQKVRKKD
QALVAVSHAHMAGGSISEDSERSLIIGNAEALPARLFDKAISYVALGHLHKPQQVNREQR
IRYSGAPIPLSFAEINYPHQVLEVELQGSELVSVEARLVPRAVALQRVGPAPLGELLEQL
AQLPMIDLLEDPNRQPWLEVRVRLDEPQPDLRQQIETALQGKAVRLVRISAEYAGPGRQE
DDEQAFVELAQMTPQDLFGRAWEQAYGNAADEQALADFAELLQDVLQEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgactggctgctcggccagctgcgcctgcgccagccc
gacgccctgctgatcgccggcgacatcttcgacaccgtcaacccgccggtcaaagcccag
gaacggctctacgacttcatcgtccaggcccacgaacaacagcccaagctggacatcgtg
atgatcgccggcaaccacgattccggctcgcgcatcgagctgccggcgccgctgatgcgc
cgcctgcgcacccatgccctgggccgtgtgcactggctcgatgaaggccagctggacgcc
gagcgcctgctgattccgctgaccaatgcccgtggcaaggtctgcgcctggtgcctggcc
ctgcccttcctgcgcccggccgaagtcaccggcccggccctgggcgacgattacctcaag
ggcatcacccaggtgcacgagcaactgatcggcgccgcgcaaaaagtccgcaagaaggac
caggcactggtcgccgtcagccacgcgcacatggccggcggcagcatcagcgaggactcc
gagcgcagcctgatcatcggcaatgccgaggcgctgccggcgcggctgttcgacaaggcc
atcagctatgtcgccctcggccacctgcacaagccacagcaggtcaaccgcgagcagcgc
atccgctacagcggcgcgccgatcccgctgtcgttcgccgagatcaactacccgcaccaa
gtgctggaagtggagctgcagggcagcgagctggtcagcgtcgaggcgcgcctggtcccc
cgcgccgtggccctgcaacgggtcggcccggcgccgctgggcgaactgctcgaacagctc
gcccagctgccgatgatcgacctgctcgaagaccccaaccgccagccctggctggaggta
cgggtgcgcctggacgaaccgcaaccggacctgcgccagcagatcgagaccgccctgcag
ggcaaggccgtgcgcctggtgcgcatcagcgccgagtacgccggccccgggcgccaggag
gacgacgagcaggcgttcgtcgagctggcccagatgaccccgcaagacctgtttggccgc
gcctgggagcaggcctacggcaacgccgccgacgagcaggccctggccgacttcgccgag
ttgctgcaagacgtgctgcaagaagaggaacagccatga
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