Pseudomonas muyukensis: KSS95_20685
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Entry
KSS95_20685 CDS
T07704
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmuy
Pseudomonas muyukensis
Pathway
pmuy00061
Fatty acid biosynthesis
pmuy00071
Fatty acid degradation
pmuy01100
Metabolic pathways
pmuy01212
Fatty acid metabolism
pmuy02024
Quorum sensing
pmuy04146
Peroxisome
Module
pmuy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KSS95_20685 (fadD1)
00071 Fatty acid degradation
KSS95_20685 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KSS95_20685 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KSS95_20685 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmuy01004
]
KSS95_20685 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmuy04147
]
KSS95_20685 (fadD1)
Enzymes [BR:
pmuy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KSS95_20685 (fadD1)
Lipid biosynthesis proteins [BR:
pmuy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KSS95_20685 (fadD1)
Exosome [BR:
pmuy04147
]
Exosomal proteins
Exosomal proteins of breast milk
KSS95_20685 (fadD1)
Exosomal proteins of breast cancer cells
KSS95_20685 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
QXH34539
LinkDB
All DBs
Position
complement(4702639..4704336)
Genome browser
AA seq
565 aa
AA seq
DB search
MIEHFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTARELEHQFND
SGAKALVCLANMAHLAEKVVPKTQVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPQAVRFNDALALGKGGAVTEANPQPNDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGANLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK
FSGFVGLNTLFVALCNNEGFRNLDFSSLKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPSEANQVGTIGIPVPSTLCKVIDDNGQELPLGEVGELCVKGPQVMKGYWQ
RDEATAEIIDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGIPDEKSGEVIKVFIVVKPGMTLTKEQVMEHMRANVTGYKVPKAIEFRDALPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacatttttggaaggataagtacccagccggaattacggcggaaatcaatcct
gacgaattccccaatatccaggcggtgctcaagcaatcctgccaacgctttgccgacaaa
ccggcctttagcaacctgggcaagaccatcacctacggcgagctgtatgccctgtccggc
gccttcgccgcctggctgcaacagcacaccgacctcaagcctggcgatcgcatcgccgtg
caactgcccaacgtcctgcagtacccggtcgccgtgttcggcgccatgcgtgccgggctg
atcgtggtcaacaccaatccgctgtacaccgcccgcgagcttgagcaccagttcaacgac
tccggggccaaggccctggtgtgcctggccaacatggcgcacctggcggaaaaggtcgtg
cccaagacccaggtcaaacacgtcattgtcaccgaagtggccgacctgttgccaccactc
aagcgcctgttgatcaacagcgtgatcaagtacgtgaagaaaatggtcccggcctacaac
ctgccgcaggccgtgcgtttcaacgacgcgctggcgctgggcaagggcggggcggtcacc
gaggccaatccgcagcccaacgatgttgccgtgctgcagtacaccggcggcaccaccggg
gtggccaagggcgccatgctgacccaccgcaacctggtggccaacatgctgcagtgccgc
gcgttgatgggggccaacctgcacgaaggttgcgagatcctgatcaccccgctgccgctg
taccacatctatgccttcaccttccattgcatggccatgatgctgatcggcaaccacaac
gtgctgatcagcaacccgcgcgacttgccggccatggtcaaggaactgggcaagtggaag
ttcagcggctttgtcggcctgaacaccctgttcgtcgccttgtgcaacaacgaagggttc
cgcaacctcgacttctcctcgctgaagatcaccctgtccggcggcatggccctgcagttg
agcgtggccgagcgttggaaggccgtcaccggctgcgccatctgcgaaggctacggcatg
accgagaccagcccggtggcggcggtgaacccgagcgaggccaaccaggtcggcaccatc
ggcattccggtgccgtccaccctgtgcaaggtcatcgacgacaacggccaggaactgccc
ctgggcgaggtcggtgagctgtgcgtgaagggcccgcaggtgatgaagggttattggcag
cgtgatgaagcgaccgccgagatcatcgacagcgagggttggctgaagaccggcgatatc
gccttgatccagccggacggctacatgcgcatcgtcgaccgcaagaaggacatgatcctg
gtctcgggcttcaacgtgtaccccaacgagctcgaagacgtgctcgcggccctgccgggc
gtgctgcagtgcgcggccatcggtattcccgacgagaaatcgggcgaggtgatcaaggtg
ttcatcgtggtcaagccgggcatgaccctgaccaaggagcaggtgatggagcacatgcgc
gccaacgtcaccggctacaaggtgccgaaggccatcgagttccgcgatgccctgccgacc
accaacgtcggcaagatcctgcgtcgcgaactgcgtgacgaagagctgaagaagcagggc
ctgaagaagatcgcctga
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