Pseudomonas muyukensis: KSS95_21770
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Entry
KSS95_21770 CDS
T07704
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmuy
Pseudomonas muyukensis
Pathway
pmuy03030
DNA replication
pmuy03430
Mismatch repair
pmuy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSS95_21770 (dnaE)
03430 Mismatch repair
KSS95_21770 (dnaE)
03440 Homologous recombination
KSS95_21770 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmuy03032
]
KSS95_21770 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmuy03400
]
KSS95_21770 (dnaE)
Enzymes [BR:
pmuy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSS95_21770 (dnaE)
DNA replication proteins [BR:
pmuy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSS95_21770 (dnaE)
DNA repair and recombination proteins [BR:
pmuy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSS95_21770 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
QXH34735
LinkDB
All DBs
Position
complement(4908210..4911734)
Genome browser
AA seq
1174 aa
AA seq
DB search
MSVSFVHLRVHSEFSLVDGLVRIKPLAKALAGMNMPAVAITDQSNMCSLVKFYKTAMGAG
IKPICGADLWLAGADPEAPLSRICFLAMNPKGYRNLTELISRGWTDGQRNGLVIIQRDWI
APASEGLIALSAGKEGDIGMALMSNRQDEAQALLADWMAMFPERFYVELQRTNRAGDEEY
VHAAVALADKLGAPLVASNDVRFIKQSDFDAHETRVCIGEGWTLDDPRRPRGYSDQQYLK
SAEEMAELFSDLPDAIANTVEIAKRCNITVQLGKYFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNDVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYV
AEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKSDEDGREIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKNLPDVNIDFIPLDDRKTYE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCVANNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHH
PAPFMAAVLSADMHNTDKVVVLVEEVRSMKLRLDAPDVNFSDFKFTVNNDGRIVYGLGAI
KGVGEGPVEAIVEARAAGGPFKDLFDFCERIDLKRVNKRTLDALIRSGALDRLGPHFHDE
IKAYQANIDINRATLLSALGEAVKAAEQAAHTADSGHVDLFGGMFDAADVDVYANHRKVR
ELTLKERLKGEKDTLGLYLTGHPIDEYETEIRRFARQRIVDLKPARDTQTIAGMIIALRV
MKNKKGDKMGFVTLDDRSGRIEASLFADAFMAAQALLQTDAMVVVEGEVSNDDFSGGLRL
RVKTVMTMEDARTKLAESLRLKISHEALKGDRLSWLGELITRHRGGCPITLEYTGSDAKA
MLQFGDQWCIDPADGLIQALRDQFGRENVFLQYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctccttcgttcaccttcgcgtgcactccgaattctccctggtcgacggcctg
gtgcggatcaagccgctggccaaggccctggccgggatgaacatgccggcggtggcgatc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcgccggc
atcaagccgatctgcggcgccgacctgtggctggccggggccgaccccgaggcgccgctg
tcgcgcatctgcttcctggccatgaaccccaagggctaccgcaacctcaccgagctcatc
tcgcgcggctggaccgacggccagcgcaatggcctggtgatcatccagcgtgactggatc
gccccggccagcgaagggttgatcgccctgtccgcgggcaaggaaggcgatatcggcatg
gccctgatgagcaatcgtcaggacgaagcccaggccctgctcgcggactggatggcgatg
ttccccgagcgcttctacgtcgagctgcagcgcaccaaccgcgccggtgacgaggagtac
gtgcacgctgccgtggccctggccgacaagctcggcgcgccgctggtggcgagcaacgac
gtacgtttcatcaaacagtcggacttcgacgcccacgagacccgcgtgtgcatcggcgag
ggctggaccctcgacgacccgcgtcgcccgcgtggctacagcgaccagcagtacctcaag
tccgccgaggaaatggccgagctgttcagcgacttgccggacgccatcgccaacaccgtg
gaaatcgccaagcgctgcaacatcaccgtgcagctgggcaagtacttcctgcccgacttc
cccacgcccaacggcatgggcatcgacgactacctgcgccatgtttcccacgaaggcctg
gaggagcgcctggcggtgctctggccgaaggaaaccacgcccaattacgaagagaagcgc
caggtctacctggaccgcctgaagttcgagctggacatcatcatccagatgggcttcccc
ggttacttcctgatcgtcatggacttcatcaagtgggccaagaacaacgatgtgccggtt
ggcccggggcggggttcgggtgctggttcgctggtggcctacgtgttgaagatcaccgac
ctcgacccgctggcctacgacctgctgttcgaacgtttcctcaaccctgaacgtatttcc
atgcccgacttcgacgtcgacttctgcatggatggccgcgaccgggtgatcgactacgtg
gccgaggcctacgggcgcaacgcggtcagccagatcatcaccttcggtaccatggccgcc
aaggcggtggtgcgcgacgtggcgcgggtgcagggcaagtcctacggcctggccgaccgc
ctgtcgaagatgatcccgttcgaagtgggcatgaccctggagaaggcctacgagcaggaa
gagatcctgcgcgacttcctcaagagtgatgaggacggccgcgagatctgggacatggcc
ctgaagctcgaaggtgtcacccgcggtaccggcaagcacgccggtggcgtggtgatcgcg
ccgaccaagctcaccgacttctcgccgatcgcttgtgacgaagagggtggcggcctggtg
acccagttcgacaaggacgacgtcgaggccgcgggcctggtgaagttcgacttcctcggc
ctgcgtaccctgaccatcatcaagtgggcgatggagatcatcaaccgcgagcaggccaag
aagaacctgcccgacgtcaacatcgacttcatcccgctggacgatcgcaagacctacgag
ctgctgcagaaagccgagaccacggcggtgttccagctcgaatcgcgcggcatgaaggag
ctgatcaagaagctcaagcccgactgcctggaagacctcatcgcactggtggcgctgttc
cgccccggcccgctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggccgc
gcggagctggcctacccgcactcggactaccagtacgaagggctcaagccggtactggcg
cccacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtgatggcc
ggctacaccctcggtggcgcagacatgctgcgccgggccatgggtaagaaaaagcccgag
gaaatggccaagcagcgcggcggtttcatcgaaggctgcgtggccaacaatatcgatgcc
gatcttgctggtaacatcttcgacctggtagaaaaattcgccggctacggcttcaacaag
tcccactccgccgcctacggcctggtgtcgtaccagaccgcctggctgaagactcaccat
ccggcgccgttcatggccgcggtgctgtcggcggatatgcacaacaccgacaaggtcgtg
gtgctggtcgaggaagtgcgcagcatgaagctgcgcctggatgcgccggacgtgaacttc
tccgacttcaagttcaccgtcaacaacgacggccgtatcgtctatggcctgggtgcgatc
aagggcgtgggcgagggcccggtggaggcgatcgtcgaggcgcgcgccgcaggcggcccg
ttcaaggacctgttcgacttctgcgagcgtatcgacctcaagcgggtcaacaagcgtacc
ctggacgcgctgatccgcagcggcgcgctggaccgcctgggcccgcacttccatgacgag
atcaaggcctaccaggccaacatcgacatcaaccgcgcaaccttgctgtcggcgttgggc
gaggcggtgaaggccgccgagcaggccgcgcatactgccgacagcggccacgtcgacctg
ttcggcggcatgttcgacgccgccgacgtggacgtctatgccaaccaccgcaaggtgcgc
gagctgaccctcaaagaacgcctgaaaggcgaaaaggacacccttggcctgtacctcacc
ggccacccgatcgacgagtacgagaccgagatccgccgcttcgcccgccagcgcatcgtc
gacctcaagccggcccgcgacacccagaccatcgccggcatgatcattgccctgcgggtg
atgaagaacaagaaaggcgacaagatgggcttcgtcaccctcgacgaccgttccgggcgc
atcgaggcctcgctgttcgccgacgccttcatggccgcccaggccctgctgcagaccgac
gccatggtggtggtggaaggggaggtgagcaacgatgacttctccggcggcctgcgcctg
cgggtcaagaccgtgatgaccatggaggacgcgcggaccaagctggccgagagcctgcgc
ctgaaaatcagccatgaggcgctcaagggcgatcgcctgagctggctgggcgagctgatc
acccgccatcgcggtggctgcccgattaccctggagtacaccggcagcgacgccaaggcc
atgctgcaattcggcgaccagtggtgcatcgaccccgccgatgggctgattcaggcactg
cgtgaccagttcggacgtgagaacgtcttcctgcaataccgttga
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