KEGG   Pseudomonas muyukensis: KSS95_22840
Entry
KSS95_22840       CDS       T07704                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
pmuy  Pseudomonas muyukensis
Pathway
pmuy02020  Two-component system
pmuy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pmuy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KSS95_22840
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    KSS95_22840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmuy03021]
    KSS95_22840
Transcription machinery [BR:pmuy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KSS95_22840
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: QXH34938
UniProt: A0ABX8M7I6
LinkDB
Position
5143900..5145393
AA seq 497 aa
MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGDDFDNSD
PMADNAESKPAAEVQDNSFQEPTTSAETLEDGEWAERIPNELPVDTAWEDIYQTSASSLP
SNDDDEWDFTTRTSVGESLQSHLLWQLNLAPMSDTDRLIAVTLIDSINEQGYLEDTLEEI
CAGFDPELDIELDEVEAVLHRIQQFEPAGIGARSLGECLLLQLRQLPASTPWMSEAQRLV
SDFIDLLGSRDYSQLMRRMKLKEDELRQVIELVQTLNPRPGSQIESSEPEYVVPDVIVRK
DSERWLVELNQEAVPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLDHGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIYELK
YFFSSHVSTAEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLM
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgaaaccatcgctcgtcctaaaaatgggccagcaactgacgatgaccccgcagttgcaa
caggccatccgtctgctccagctctccaccctggacctccagcaggaaatccaggaagcg
ctggaatccaacccgatgctcgaacgtcaggaagacggcgacgatttcgacaacagcgac
ccaatggcggacaacgccgaaagcaagccggccgccgaagtccaggacaacagcttccag
gagccgaccaccagcgccgaaaccctggaagacggcgagtgggccgagcgcattcccaac
gaactgcccgtcgacaccgcctgggaagacatctaccagaccagcgccagcagcctgccc
agcaacgatgacgacgagtgggacttcaccacccgcacctcggtgggcgagagcctgcag
agccacctgctctggcagctcaacctggcgccgatgtccgacaccgaccgcctgatcgcg
gtgaccctgatcgacagcatcaacgaacagggctacctggaagacaccctcgaggaaatc
tgcgcaggtttcgaccccgagctcgacatcgagctggatgaggtcgaagcggtgctgcac
cgcatccagcaattcgaacctgccggcatcggcgcccgctcgctgggtgaatgcctgttg
ctgcaactgcgccaactgccggcctcgacgccgtggatgagcgaggcgcagcgcctggtc
agcgatttcatcgacctgctcggcagccgcgactacagccagttgatgcggcgcatgaag
ctcaaggaagacgagctgcgccaggtcatcgagctggtacagaccctgaacccgcgcccg
ggctcgcagatcgagtccagcgagccggagtacgtggtgccggacgtgatcgtgcgcaag
gacagcgagcgctggctggtcgagctcaaccaggaagcggtgccgcgcctgcgcgtcaac
ccgcaatacgccgggttcgtccgccgcgccgacaccagcgccgacaacaccttcatgcgc
aaccagttgcaggaagcgcgctggttcatcaagagcctgcaaagccgcaacgagacgctg
atgaaggtggccacgcagatcgtcgagcaccagcgcggtttcctcgaccacggcgacgag
gccatgaagccgctggtgctgcacgacatcgccgaggcggtaggcatgcacgagtcgacc
atctcgcgggtgaccacgcagaaatacatgcacacgccacgcggcatctacgaactgaaa
tactttttctcgagccacgtcagcaccgccgaaggcggcgaatgctcgtccacggcgatc
cgcgcgatcatcaagaaactggtggcggcggaaaatcagaaaaagccattgagtgacagc
aagatcgctggtttactggaggcacaaggcatccaggtagcccgtcgcaccgtcgccaag
taccgcgagtcgctggggatcgccccttcgagcgagcgcaagcgactgatgtag

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