Pseudomonas muyukensis: KSS95_22840
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Entry
KSS95_22840 CDS
T07704
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pmuy
Pseudomonas muyukensis
Pathway
pmuy02020
Two-component system
pmuy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmuy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSS95_22840
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KSS95_22840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmuy03021
]
KSS95_22840
Transcription machinery [BR:
pmuy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSS95_22840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QXH34938
UniProt:
A0ABX8M7I6
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All DBs
Position
5143900..5145393
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AA seq
497 aa
AA seq
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MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGDDFDNSD
PMADNAESKPAAEVQDNSFQEPTTSAETLEDGEWAERIPNELPVDTAWEDIYQTSASSLP
SNDDDEWDFTTRTSVGESLQSHLLWQLNLAPMSDTDRLIAVTLIDSINEQGYLEDTLEEI
CAGFDPELDIELDEVEAVLHRIQQFEPAGIGARSLGECLLLQLRQLPASTPWMSEAQRLV
SDFIDLLGSRDYSQLMRRMKLKEDELRQVIELVQTLNPRPGSQIESSEPEYVVPDVIVRK
DSERWLVELNQEAVPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLDHGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIYELK
YFFSSHVSTAEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLM
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctcgtcctaaaaatgggccagcaactgacgatgaccccgcagttgcaa
caggccatccgtctgctccagctctccaccctggacctccagcaggaaatccaggaagcg
ctggaatccaacccgatgctcgaacgtcaggaagacggcgacgatttcgacaacagcgac
ccaatggcggacaacgccgaaagcaagccggccgccgaagtccaggacaacagcttccag
gagccgaccaccagcgccgaaaccctggaagacggcgagtgggccgagcgcattcccaac
gaactgcccgtcgacaccgcctgggaagacatctaccagaccagcgccagcagcctgccc
agcaacgatgacgacgagtgggacttcaccacccgcacctcggtgggcgagagcctgcag
agccacctgctctggcagctcaacctggcgccgatgtccgacaccgaccgcctgatcgcg
gtgaccctgatcgacagcatcaacgaacagggctacctggaagacaccctcgaggaaatc
tgcgcaggtttcgaccccgagctcgacatcgagctggatgaggtcgaagcggtgctgcac
cgcatccagcaattcgaacctgccggcatcggcgcccgctcgctgggtgaatgcctgttg
ctgcaactgcgccaactgccggcctcgacgccgtggatgagcgaggcgcagcgcctggtc
agcgatttcatcgacctgctcggcagccgcgactacagccagttgatgcggcgcatgaag
ctcaaggaagacgagctgcgccaggtcatcgagctggtacagaccctgaacccgcgcccg
ggctcgcagatcgagtccagcgagccggagtacgtggtgccggacgtgatcgtgcgcaag
gacagcgagcgctggctggtcgagctcaaccaggaagcggtgccgcgcctgcgcgtcaac
ccgcaatacgccgggttcgtccgccgcgccgacaccagcgccgacaacaccttcatgcgc
aaccagttgcaggaagcgcgctggttcatcaagagcctgcaaagccgcaacgagacgctg
atgaaggtggccacgcagatcgtcgagcaccagcgcggtttcctcgaccacggcgacgag
gccatgaagccgctggtgctgcacgacatcgccgaggcggtaggcatgcacgagtcgacc
atctcgcgggtgaccacgcagaaatacatgcacacgccacgcggcatctacgaactgaaa
tactttttctcgagccacgtcagcaccgccgaaggcggcgaatgctcgtccacggcgatc
cgcgcgatcatcaagaaactggtggcggcggaaaatcagaaaaagccattgagtgacagc
aagatcgctggtttactggaggcacaaggcatccaggtagcccgtcgcaccgtcgccaag
taccgcgagtcgctggggatcgccccttcgagcgagcgcaagcgactgatgtag
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