Pasteurella multocida subsp. multocida HN06: PMCN06_0017
Help
Entry
PMCN06_0017 CDS
T01776
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PMCN06_0017 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmv03400
]
PMCN06_0017 (mutM)
Enzymes [BR:
pmv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PMCN06_0017 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PMCN06_0017 (mutM)
DNA repair and recombination proteins [BR:
pmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PMCN06_0017 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_TiaS
DUF8259
NFACT_N
Zn_ribbon_6
DZR
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AFF23281
LinkDB
All DBs
Position
13069..13776
Genome browser
AA seq
235 aa
AA seq
DB search
MVSEELAQITQQKVIALSRRAKYLIIQLETGYMIGHLGMSGSLRVVEKGDLIDKHDHLDI
VVNNGKVVRYNDPRRFGAWLWTEKLDEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALK
TFLMDNAVVVGVGNIYANETLFLCNLHPQKTAGSLTKAQCGQLVEQIKQVLSNAIQQGGT
TLKDFLQPDGRPGYFVQELRVYGNKDKPCPTCGTKIESLVIGQRNSFYCPKCQKR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggtaagcgaagaattagcgcaaattacacaacaaaaagtcatcgcattaagtcgccgt
gcgaagtatttaattatccaactcgaaacaggctatatgattggacatttagggatgtca
ggatcattgagagttgtggaaaaaggagatcttattgataaacatgatcatcttgatatc
gtagtgaataacggaaaagttgtgcgttataacgatcctcgtcgttttggcgcgtggtta
tggacagagaagttggacgaatttcctctttttctgaaattaggtccagagcctctgtct
gaggaatttgattctgattacttgtggcaaaaaagtcgtaaaaaacagaccgcacttaaa
acttttttaatggataatgctgtcgtcgttggcgttgggaatatctatgcgaatgaaacg
ttatttctttgtaacctacatccgcaaaaaacagcaggaagtttaactaaggcacaatgt
gggcagttagtagaacaaataaaacaagtgctgtctaacgcaatccaacaaggtggtacg
acgctaaaagattttctccaaccggatgggcgtccaggttattttgtccaagaattgcgg
gtttatggtaataaggataagccttgtccaacatgtggcacaaaaatagaaagtttagtg
atagggcaacgaaatagtttctattgccccaagtgtcagaagagataa
DBGET
integrated database retrieval system
