Pasteurella multocida subsp. multocida HN06: PMCN06_0163
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Entry
PMCN06_0163 CDS
T01776
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv03030
DNA replication
pmv03410
Base excision repair
pmv03420
Nucleotide excision repair
pmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMCN06_0163 (polA)
03410 Base excision repair
PMCN06_0163 (polA)
03420 Nucleotide excision repair
PMCN06_0163 (polA)
03440 Homologous recombination
PMCN06_0163 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmv03032
]
PMCN06_0163 (polA)
03400 DNA repair and recombination proteins [BR:
pmv03400
]
PMCN06_0163 (polA)
Enzymes [BR:
pmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PMCN06_0163 (polA)
DNA replication proteins [BR:
pmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PMCN06_0163 (polA)
DNA repair and recombination proteins [BR:
pmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PMCN06_0163 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMCN06_0163 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
AFF23421
LinkDB
All DBs
Position
complement(145205..147997)
Genome browser
AA seq
930 aa
AA seq
DB search
MAKIAENPLVLVDGSSYLYRAFHAFPPLTNSLNEPTGAMYGVLNMLKSLISQVQPSHIAV
VFDAKGKTFRDEIFEQYKSHRPPMPEELRSQILPLHNIIRALGIPLLVVEGVEADDVIGT
LAVQASRAGKKVLISTGDKDMAQLVDENIMLINTMNNTLLDREGVLEKYGLPPELIIDYL
ALMGDSSDNIPGIPGVGEKTALGLLQGIGSMAEIYANLDKVASLSLRGAKTLGAKLAEAK
DLADLSYLLATIKTDVALDVSPEQLTFGVANKDALIEYFARYEFKRWLNEVMNGGESSVT
NGSEQAVKINPYQATPSANERENTVSVQIDRSQYQCLLELSELKRWIDKLNQAKCIAIDT
ETDSLDYMVAHLVGVSFALENGEAAYLPLRHDYLGAPQQVDFQTALSLLKPVLENPEIHK
VGQNIKYDLSIFARHGIEVQGVSYDTMLLSYVLDSTGRHNMDELAKRYLGHQTIHFEDIA
GKGKAQLTFNQIPLEQSAEYAAEDADITMKLQQVLWEKVAAQPELVKLYQTMELPLASVL
SRIERHGVLIDSDALFSQSQQIGVRLTALEQQAYELAGQQFNLASTKQLQEILFDKLSLP
VLKKTPKGAPSTNEEVLEELAYEHALPKILVEHRGLSKLKSTYTDKLPLMVNKDTGRVHT
SYHQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIAPEGYQIMAADYSQIELRIMAHL
SQDKGLINAFNEGKDIHRSTAAEIFGIPLAQVSSEQRRSAKAINFGLIYGMSSFGLSRQL
GIPRHEAQKYMDLYFQRYPGVQAFMHDIRETAKAQGYVTTLFDRRLYLPDIQSSNAIRRK
AAERVAINAPMQGTAADIIKRAMITLDREIAEQPDIKMIMQVHDELVFEVHSDKIEHFRT
IIKTTMEQAAQLVVPLIVDVGVGKNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcgcagaaaaccctttagtcttagtggatggttcttcgtatctataccgc
gcatttcatgcatttccgcctttaacgaactcattaaatgagccaactggcgcaatgtac
ggtgtattaaatatgttaaaaagcctcatttcacaagtacaaccaagccatattgccgtg
gtttttgatgcgaagggcaaaacctttcgtgatgaaatatttgaacaatacaaatctcat
cgtcccccaatgcctgaggaattacgcagtcaaattctgccactgcacaatattattcgg
gccttaggcattcctttgttagtggtagaaggtgtggaagccgatgacgtcattggtacc
cttgcggtgcaagcctctcgtgccggaaaaaaagtcttaattagtaccggtgacaaagac
atggcgcagcttgttgatgagaatattatgctcattaacaccatgaacaatactttatta
gatcgcgagggagtacttgaaaaatatggtctgcctccggaattaatcattgattacctc
gcgctaatgggcgatagctcagataatattccgggaattccgggcgtaggtgaaaaaacg
gcgttaggtctgctacaaggcataggtagcatggctgagatttatgcaaatttagacaaa
gtcgccagtttatccctacgtggcgccaaaacattaggagcaaaattagccgaggcaaaa
gatctcgctgatttatcttatctactcgccaccattaaaaccgatgttgcactggatgtc
agtccagaacaactgacttttggtgttgcgaataaagatgcgttaattgaatattttgct
cgttatgaatttaagcgctggcttaacgaagtgatgaatggaggagaaagctccgtcacc
aatggatcggaacaggcagtgaagatcaatccttaccaagccactccaagtgcaaatgag
agagaaaataccgtttctgtccaaattgaccgtagccaataccaatgtcttctcgaactc
agtgaattgaagcgctggatagacaagcttaatcaagccaaatgtattgcaattgatact
gaaacagacagtttagactatatggtggctcatttagttggggtatcttttgcgttagag
aatggtgaagctgcttatttaccattacgccatgattatcttggtgcacctcagcaagta
gattttcagaccgcactttctttgcttaaacctgttttagagaaccctgaaatccataaa
gtaggacaaaatattaagtacgatttaagtatctttgcccgtcacggtattgaggtacaa
ggcgtgagctatgacaccatgttactgtcttatgtgttagacagtactgggcgccataat
atggatgaattagccaaacgttatttaggtcaccaaaccattcactttgaagatatcgcg
ggtaaaggcaaagctcagctcacctttaatcaaataccacttgaacaatcggcggaatat
gcggcagaagatgccgatattaccatgaaattacagcaggtcttatgggaaaaagtggca
gcacagcctgaattagtgaagttatatcaaaccatggaactgcctttagcctcggtgctg
tctcgaattgaacgtcatggcgtgctcattgatagtgatgcactgtttagtcagtcgcaa
caaattggcgtaagattgaccgcacttgaacaacaggcgtatgaattggctggacaacaa
tttaatttggcctcaaccaaacagttgcaagagatcctgttcgataaattgagcttacct
gtcttgaagaaaacgcctaaaggcgcgccatcaacgaatgaagaagtcttagaagagctt
gcctacgagcacgccttgccaaaaattcttgtggagcatcgtggattaagtaaattaaaa
tccacttatactgacaaattaccgctcatggtgaataaagacacgggacgtgtacatact
tcctatcatcaggcggtaactgccacaggtcgtctttcatcgagtgatcccaatttacaa
aatattccgattcgcaacgaggaagggcgccgcattcgtcaagcctttattgcacctgaa
ggctatcaaattatggccgcggactattcccaaattgaactgcgaatcatggctcactta
tcgcaagataaagggctaattaacgcatttaatgaaggaaaagatattcaccgttcaaca
gcggcagagatctttggcattccattagcgcaagttagcagtgaacaacgtcgtagcgcc
aaagccattaactttggtttaatttatggcatgagttcatttggactttctcgtcaatta
ggcattccacgtcatgaagcacaaaaatacatggacttgtatttccaacgttaccccggt
gtacaagcctttatgcatgacattcgcgaaacagccaaagcacaaggttatgtaacaact
ttgtttgaccgacgcttatatttacctgatatccaatcttccaatgccattcgtcgcaaa
gcggctgaacgggttgctatcaacgcgccaatgcaagggacagcagcagatatcattaaa
cgagcgatgattactttagatcgtgaaatcgcagaacaacctgacattaaaatgatcatg
caagtacacgatgaattggtctttgaagtacactcagataaaatcgaacactttcgcacg
atcatcaaaaccacgatggaacaagctgctcaacttgtggtaccgctgattgtagatgtg
ggtgtgggtaaaaactgggacgaggctcattaa
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