Pasteurella multocida subsp. multocida HN06: PMCN06_0383
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Entry
PMCN06_0383 CDS
T01776
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv03030
DNA replication
pmv03430
Mismatch repair
pmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PMCN06_0383 (dnaX)
03430 Mismatch repair
PMCN06_0383 (dnaX)
03440 Homologous recombination
PMCN06_0383 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmv03032
]
PMCN06_0383 (dnaX)
03400 DNA repair and recombination proteins [BR:
pmv03400
]
PMCN06_0383 (dnaX)
Enzymes [BR:
pmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PMCN06_0383 (dnaX)
DNA replication proteins [BR:
pmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PMCN06_0383 (dnaX)
DNA repair and recombination proteins [BR:
pmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PMCN06_0383 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_14
ResIII
SpoIIP
AAA_2
AAA_16
AAA_18
DUF6918
Abhydrolase_4
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFF23638
LinkDB
All DBs
Position
399522..401666
Genome browser
AA seq
714 aa
AA seq
DB search
MSYQVLARKWRPKTFSDVVGQTHILTALSNGLKENRLHHAYLFSGTRGVGKTSIARLFAK
GLNCVHGVTAEPCGECEHCKAIEQGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVQGRY
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLKALEQ
QQIAQHLEFILTQEKIPFEFLALEKLAKAAQGSIRDSLSLTDQAIAMSNGNITLNVVHEM
LGLLDDDQALDIIHALQQGQGESVMKGVQAVAEKGGDWDELLRDIGENLHKIAMQQLLPS
SQLDDTSRIGFLASHISPEDVQFFYQVMLTGRKELPYAPNRRIGVEMTLLRALAFHPKFV
AVASTHATPISEQDIGGSSTRHIEVPIVSQNIKSQYKSQVKSTVAAPAQVSPSVEEKVHT
HTEETETYSPAFDALAQIDKLDHLTITPQKEKKKYSSSTEALAPRVSLSSDTSSSTLTSL
LVIESKPRDTSFIKNKASALSTLSAPETALSSASPLNTPVLQATQHTEPEGEDEDDIIDD
TLLAETYRWEWRNPELAKTQEGIKPSALKQRLEQEITPELRAKVIDIARKQDFWTDCVES
LDIQNLTKELALNCILLSHDGEVFHLGVRDNKAHLHTTNAQQQLQQALSQLQQQAMNVLI
SPTDSDNLTPTEWYRQTYKALREKAQQALQQDEKLQLFLHEFSAEIELSTVKPI
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagtcttggcacgaaaatggcgaccaaaaacctttagtgacgtggttggg
caaacccatattttaaccgcgctttctaatgggttgaaagaaaatcgcctgcatcatgcc
tatctcttttctggaacgcgtggtgtagggaaaacgtcgatagctcgtttatttgcgaaa
ggcttaaattgcgttcatggtgtgacagccgaaccttgtggtgaatgtgaacattgtaaa
gcaattgaacagggaaactttattgatctgattgaaattgacgcagcatcacgtacgaaa
gtcgaagatacgcgtgagttattggataatgtacaatacaaaccagtacaaggacgctat
aaggtttatctaatcgacgaagtccatatgctttcccgtcattcgtttaacgctttactg
aaaaccttagaagaaccaccggagtatgtcaaattcttactggcgaccactgatccgcaa
aaactgcctattacgattttatcccgttgtatgcagtttcatttaaaggcgttggaacag
caacaaatcgcacagcatcttgaatttattcttacccaagagaaaatcccctttgagttt
cttgcgttagaaaaattagccaaagctgcacagggcagtattcgtgatagcttaagttta
acggatcaagcgattgcaatgagtaatggcaacattaccttaaatgtggtgcatgagatg
ttaggcttgcttgatgatgatcaagctttagacattatccatgctttgcaacaagggcag
ggtgagtcagtgatgaaaggggtacaagccgttgcggaaaaagggggggattgggacgaa
ttattgcgtgatatcggcgagaatttgcataaaattgccatgcaacagttattgcctagt
tcacagctggatgatacgagtcgaatcggttttctagccagtcatatttcaccagaagat
gtgcagtttttctatcaagttatgctcacgggacgtaaagaactgccgtatgcaccaaat
cgtcgtattggggttgaaatgacgttattgcgggcattagcctttcatcctaaattcgtt
gctgtggcatcaacgcatgcaacgcccatctctgagcaagatataggcggttcatcaacg
cgtcatattgaagtcccgatcgtttcacaaaatataaaatcgcaatataaaagccaagtg
aaatcaacagtcgcagcgccagcacaggttagcccttctgttgaggaaaaggtgcacaca
cacacagaagaaacggaaacgtattcgcctgcatttgatgctttagctcagattgataaa
ttagatcatttaaccatcacaccacagaaagaaaaaaaaaagtatagttcatcaacagaa
gcgttagcaccacgggtttccttatcaagtgatacctcctcttctacgttaacatcatta
ctggtgattgaaagtaaaccgcgtgatacaagtttcataaaaaataaggcttccgcttta
tcaacactatctgcgccagaaacggcgctatcctcagcctctcctttaaatacgcctgta
ttacaagcaacacagcatactgaacctgaaggagaagacgaagatgacatcatcgatgat
acgcttttggcggaaacttatcgttgggaatggcgtaatccagaattggctaaaacacaa
gaggggattaagccttctgctttaaaacagcgtttagaacaagaaattacgcctgaattg
cgcgcgaaagtgattgatatcgcacgtaaacaagatttttggacagattgtgtagagtca
cttgatatccagaatttaaccaaagaattagccttaaactgtattttactttcacatgat
ggggaagtgtttcatcttggcgtgcgtgacaacaaagcgcacttacacaccacgaatgca
caacagcagttacagcaagcattgagccaattacaacagcaagctatgaatgtgctgatc
tcgccgacggactctgacaacttgacaccaacagaatggtatcggcaaacctataaagcg
ttgcgtgaaaaagcgcaacaagcgttacagcaagatgagaaattgcagctttttttacat
gaatttagtgcagaaatcgagctttcgacagtaaaaccaatttaa
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