Pasteurella multocida subsp. multocida HN06: PMCN06_0430
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Entry
PMCN06_0430 CDS
T01776
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv03420
Nucleotide excision repair
pmv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PMCN06_0430 (uvrD)
03430 Mismatch repair
PMCN06_0430 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmv03400
]
PMCN06_0430 (uvrD)
Enzymes [BR:
pmv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMCN06_0430 (uvrD)
DNA repair and recombination proteins [BR:
pmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMCN06_0430 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PMCN06_0430 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
DUF4391
Motif
Other DBs
NCBI-ProteinID:
AFF23685
LinkDB
All DBs
Position
454159..456339
Genome browser
AA seq
726 aa
AA seq
DB search
MDISALLDGLNDKQRDAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIAVEQVSEGSIMAV
TFTNKAAAEMRHRIESTLANHASQRLFGMWVGTFHSIAHRLLRAHHLDANLPLDFQILDA
DDQLRLVKRLLKLHNFDEKIFIPKQVCWYINNKKDDGLRAHQIDDNNDRHEREWIKIYQI
YQDTCDRAGLVDFAELLLRAYELWLKKPVILQRYQQRFQHILVDEFQDTNKIQYAWVKLL
AGEQGKVMIVGDDDQSIYGWRGAKIENIQRFLDDFSNAQTIRLEQNYRSTGNILASANQL
ISNNSNRLGKNLWTDGEKGEPVGIYAAFNELDEALFVSSQIKQWIENGGKLKDCAILYRS
NSQSRVIEEALIRSQLPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVVNTPPR
SIGERTLDMLRSVTREREVTLWQATQLAIHENLLTARAATALQRFLELINSLQQDTSEMP
LFAQTDFVIKHSGLYAMYQQEKGEKGEVRIENLEELVTATKEFIKPDEAEQLSDLTAFLT
HASLEAGEEQASPHQDYVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAKQKLTICYAESRRLYAKEERHLPSRFIAELPTECIQEIRLSGTVTRAMNQ
QKVGSVAPSLQENEWKMGQKVLHSKFGQGTIINVEGAENNTRLQIAFQNQGIKWLIAHLA
KLEKIR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcagcattattagatgggttaaatgataaacaacgtgatgcggttgccgcg
ccactcggcaattacttggtgttggcgggggcagggagtggtaaaacacgtgttttaaca
catcgtattgcttggttaattgcagtggaacaggtttctgaagggagtatcatggcagta
accttcaccaataaagccgcggctgaaatgcgtcatcgtatcgaaagcaccttagctaat
catgcttctcaacgtttatttggtatgtgggtgggcacgttccacagcattgcccaccgc
ttattgcgcgcccatcatcttgatgccaacttacccctagatttccaaattctcgatgcg
gatgatcaactgcgtttagtgaagcgcctactcaaattacataattttgatgagaaaatt
tttattcctaagcaagtctgctggtatatcaataataaaaaagatgacgggttaagagcg
caccaaattgatgacaataatgatcgacatgagcgggaatggataaaaatttatcagatt
tatcaagatacttgtgatcgtgctggtttagtggattttgcggaattgttattacgtgct
tacgaattatggctgaaaaagcctgtaattttacagcgttatcaacaacgttttcagcac
attttggtcgatgagttccaagatactaataagatccaatatgcttgggtaaaattgctt
gcgggggaacaaggcaaggtgatgatcgtgggagatgacgatcaatcgatttatggttgg
cgcggggcaaaaattgaaaatatccaacgctttttagatgatttttccaatgcgcaaacc
atccgtcttgaacaaaattatcgttccacggggaatattttggcaagtgccaaccagctt
atttccaataacagcaatcgtcttggtaaaaatttgtggacggacggagaaaaaggtgag
ccagtaggaatctatgcggcttttaatgaattagatgaagccttatttgtttcctcacaa
attaaacaatggatagaaaatggcggtaagctaaaagattgtgccattttataccgcagt
aatagccaatcccgtgtgattgaagaggcgttaattcgttctcaattaccttatcgtatt
tatggcggtatgcgtttcttcgagcgtcaagagattaaagatgcccttgcttatttacgt
cttattgccaatcgtcaagacgacgccgcgtttgaacgggtggtcaatacgccacctcgt
agtattggtgaacgaacgttagatatgctgcgtagtgtgacccgcgaacgtgaagtgact
ttgtggcaagccacccaattagctattcatgaaaatttactgacggcgagagcagcaacc
gcactacaacgctttttagagctgattaattccttacagcaagataccagtgaaatgccc
ttatttgcgcaaaccgattttgtgattaagcattctggtttatatgccatgtatcaacag
gaaaagggggaaaagggtgaagtgcggatcgaaaacttagaagagttagtgactgccaca
aaagaatttattaagccagatgaggcagaacagttatctgatttaacagcctttttaact
catgcctccttagaagcaggggaggaacaagcttctccacatcaagactatgttgaaatg
atgacattgcactctgcaaagggattggaattccctcgggtatttatggtgggggttgaa
gaagggctatttccaagtttccgatcttttgaagaaccggggcgtttagaagaagagcgt
cgcttagcttatgttgggatcacgcgcgcaaaacaaaagttgacgatttgctatgcggaa
agtcgccgtctatatgccaaagaagaacgtcatcttccttcccgttttattgctgaatta
cctacggaatgtattcaagaaatccgcttaagtggtacggtgacacgtgccatgaatcag
cagaaagtcggatcggttgcaccgagtttacaggaaaatgaatggaaaatggggcaaaaa
gtgctacatagcaaatttgggcaaggtacgatcattaatgtggaaggggcggagaataat
actcgcttacaaattgcattccaaaatcaagggattaaatggctgattgcccatttagcc
aaattagaaaaaattcgttaa
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