Pasteurella multocida subsp. multocida HN06: PMCN06_0496
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Entry
PMCN06_0496 CDS
T01776
Symbol
ygdH
Name
(GenBank) LOG family protein YgdH
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv00230
Purine metabolism
pmv00240
Pyrimidine metabolism
pmv01100
Metabolic pathways
pmv01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PMCN06_0496 (ygdH)
00240 Pyrimidine metabolism
PMCN06_0496 (ygdH)
Enzymes [BR:
pmv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
PMCN06_0496 (ygdH)
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
STALD
Motif
Other DBs
NCBI-ProteinID:
AFF23751
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All DBs
Position
complement(532810..534177)
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AA seq
455 aa
AA seq
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MDKNIYYVNPRGSMDQLSHLEVELLTKKAKSQLYTLYRNCSLAVLNSGAVTDDSRALLNK
YPDFDIHLVARERGVSLELHNPPKEAFVDDRIIRSIQYHLFAVLRDILFVNVMSQRLNPD
NIQDSKHITNLVFAILRNAKALPIGEHPNLVVCWGGHSINQVEYQYCRAVGTELGHRELN
IITGCGPGVMEAPMKGAAIGHANQRYKHSRFIGITEPSIIASEPPNPIVNELIIMPDIEK
RLEAFVRMGHGIVIFPGGPGTFEELLYILGIKLAEENKGKTLPLILTGPKESADYFATID
RFIGDTLGKEAQALYDIIIDDPVKVARKMSQTMHDVKMERYQTGDAYGFNWSLKIPTDFQ
QPFIPTHENMANLDLHRNQSTLGLIANLRRAFSGIVAGNIKPETQDAIEEYGVFKLHGDA
ELLDKIDQVLQDFIVQHRMKLPDGNDYVPCYELVK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaatatttattatgtgaatccacgcggaagcatggatcagctctctcattta
gaggtcgagctactcaccaaaaaagccaaaagtcaactttataccctttatcgtaattgt
tcactggcggtcttaaactctggtgccgtgacggatgatagccgtgcattgctcaataaa
taccctgattttgatattcatctggtagcaagagaacgtggtgtttcccttgagctacat
aatcctcccaaagaagcatttgttgatgatcgcattattcgcagtattcaatatcatttg
tttgctgtactgcgtgacattttatttgtcaatgtgatgagccaacgtttaaaccctgac
aatattcaagacagtaaacacatcacaaatttagtgtttgctatcttgcgtaacgctaaa
gccttaccgattggtgaacatccaaatcttgtagtgtgttggggagggcattcgattaat
caagtagaatatcaatattgtcgtgcggtaggcaccgaactgggtcatcgtgaattgaat
attattactggttgtggaccaggtgtcatggaagccccgatgaaaggggcagcaattggt
catgcgaaccaacgctataagcatagccgatttatcgggattacagagccatcaattatt
gcttccgagccacctaatccgatcgttaatgaattaattattatgcctgatattgaaaaa
cgtcttgaagcattcgtgcgtatgggacatggcattgtgattttcccagggggaccgggt
acttttgaggaattactttatattcttggcatcaaattagcagaagaaaataaaggcaaa
acattacccttaattttaacgggtccaaaagaaagtgcggattatttcgcgacgattgac
cgctttattggtgatacattaggtaaagaagctcaagcattatatgacatcattatcgat
gaccctgtaaaagtggcaagaaaaatgagccaaacgatgcatgacgtcaaaatggaacgc
tatcaaaccggcgatgcttatggctttaattggtcactgaaaattccaacggatttccaa
caaccatttattcctacccatgaaaatatggcaaatcttgatctccaccgtaatcaatct
acactgggtctgatcgccaatttacgccgcgccttctcaggtatcgtggcaggcaatatc
aaaccagaaacacaagatgcgattgaagaatacggggtatttaaattacatggggatgca
gaactcttggataaaatcgatcaggttttacaagattttattgttcaacatcgcatgaaa
ttacctgacggaaatgattatgtgccttgctatgaattagtcaaatag
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