Pasteurella multocida subsp. multocida HN06: PMCN06_0765
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Entry
PMCN06_0765 CDS
T01776
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmv03016
]
PMCN06_0765 (rnd)
Enzymes [BR:
pmv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PMCN06_0765 (rnd)
Transfer RNA biogenesis [BR:
pmv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PMCN06_0765 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AFF24014
LinkDB
All DBs
Position
complement(816155..817306)
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AA seq
383 aa
AA seq
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MNSQQKEIKNKPHFQVITSDLALAEICYSAQQKAVIALDTEFVRIKTLYPQLGLIQLYDG
ERVSLIDPTTIQDFSPFIALLANTAVLKVLHACSEDLEVFQHSFNQLPTPMLDTQVMANF
LGFPNSTGLATLVQHYFQLEIDKGASRTDWLARPLSDNQLVYAAADVWYLLPLYQRMQEA
LAQTRWQEAAQQDCEALLLKREQHKDPELAYLSIPNAWRLTPSELMRLKLLAKWRQEEAM
KRDLALNFVVRAEHLWQVAKHNPKHTSELLALGLSHHEVRIHGKKILHLIGQLKRFDDVD
YPMPIVRIADDSRYKKALKGLQQKLKSIAPPDLAAEVIASKRGLENLMKWCWLDNQDPTQ
LPELLVGWRREFGLVLLNTLANG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtcaacaaaaagaaataaaaaataaaccgcactttcaagtcattacttctgat
ttggcgctggcagaaatttgttattctgcccaacaaaaagccgtaattgcactcgatact
gaatttgttcgtatcaaaacactctatccacaattagggcttattcaactctatgatggg
gaacgagtcagtttaattgatcctactaccattcaagatttttcaccatttattgcgtta
ctggcgaatacggctgtgttgaaagtgcttcatgcgtgtagtgaagatttagaggtgttc
caacatagttttaaccagcttcctacgccgatgctagatacacaagtcatggcaaacttt
ctaggttttccaaattctactggtctagcgacgttagttcagcattattttcaacttgaa
attgataaaggtgcctcgcgcacggattggttagcccgtcctttatcggacaaccagtta
gtttatgccgcagctgacgtgtggtatttattaccgctttatcaacgcatgcaagaggcg
ttggctcaaacacgatggcaagaggccgcgcaacaagattgtgaggcgttgttgttaaag
cgtgaacaacataaagatccggagctagcgtatttgagcattcctaatgcatggcgctta
acaccgagtgaattaatgcgtttaaaactgttggcgaaatggcgtcaagaggaagcgatg
aaacgggatttagccttaaattttgtagtaagggcagagcacttatggcaagtggctaaa
cataatccaaaacatacgtcagaattgctcgcgttaggattaagtcatcatgaagtgcgt
attcatggcaaaaaaatattgcatttgataggacaacttaaacgctttgatgatgtggat
tatccgatgccgatcgtacgtattgcggatgactcacgttataaaaaagcactcaaaggc
ttacaacaaaagctgaaaagcattgcgcctcctgatttagctgcagaagtgattgccagt
aagcgtggtttagaaaacttaatgaaatggtgttggttagacaatcaagatccaactcag
ttaccagagctattggtcggttggcgacgtgaatttggcttagtgttgttaaatacactc
gcaaatggatag
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