Pasteurella multocida subsp. multocida HN06: PMCN06_0820
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Entry
PMCN06_0820 CDS
T01776
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmv03016
]
PMCN06_0820 (truB)
Enzymes [BR:
pmv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PMCN06_0820 (truB)
Transfer RNA biogenesis [BR:
pmv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PMCN06_0820 (truB)
Prokaryotic type
PMCN06_0820 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AFF24069
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All DBs
Position
complement(883772..884695)
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AA seq
307 aa
AA seq
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MAKPRKRGRDIDGVFLLDKPQGMSSNDIMQKVKRVFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYQVTAKLGERTDTSDAEGQVVETRDVQVDVQDILAALPHFRGNLM
QVPTMFSALKHQGKPLYEYARAGITVEREARPITIFDLQFIAYDAPYLTLEVHCSKGTYI
RTLVDDLGEYLGCGAHVTVLRRTAVANYPVEAMMDWDTLQVLAAQQDLALLDQHLLPTDS
AVSALPALHLNQEQSKAISFGQRVKFDNPTQLTGQVRLFSDTQQFLGVALVDEHNVIRPQ
RLMTQNT
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagccgcgcaaacgtggacgtgatattgacggcgtttttttgctagataagcct
caagggatgagctccaatgatattatgcaaaaggtcaaacgtgtgtttcaagctaacaaa
gcaggacacacaggtgcattagatcctttggcaacggggatgttgccaatttgcttaggt
gaagccacgaagttttcacaatttttgttggatgcggataaacgttatcaagtgaccgcg
aaacttggggaaagaaccgatacgtccgatgcggaagggcaagtcgttgaaacacgagat
gtgcaggtagatgtgcaggacattttggctgcactaccacattttcgtggcaatttaatg
caagttcccacgatgttttctgcgttaaaacatcaaggtaagcctttatatgagtatgca
cgtgccggcataacagtggaacgagaagctcgcccgatcacgatttttgacttgcaattt
attgcgtatgatgccccttatttaacgctggaagtacattgttcaaaaggcacttatata
cgtactttagtggatgatttaggcgaatatttgggctgtggtgcacatgtaacggtgtta
cgtcgaaccgctgttgccaattatcctgtggaggcgatgatggactgggacactttacaa
gttttagctgcacaacaagatctcgcattattagatcagcacttattaccgacagacagt
gcggtctccgcattacctgcattgcatttaaatcaggaacaaagtaaagccattagtttt
ggtcaacgtgtcaagtttgacaatccaactcagcttactggacaagttcgtttattttct
gacacgcaacaatttttaggtgttgccttagtcgatgagcataatgtcattcgtccgcaa
cgtttgatgacacaaaatacgtaa
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