Pasteurella multocida subsp. multocida HN06: PMCN06_1023
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Entry
PMCN06_1023 CDS
T01776
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmv01002
]
PMCN06_1023
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmv01011
]
PMCN06_1023
Peptidases and inhibitors [BR:
pmv01002
]
Cysteine peptidases
Family C82
PMCN06_1023
Peptidoglycan biosynthesis and degradation proteins [BR:
pmv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PMCN06_1023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
AFF24265
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All DBs
Position
complement(1112054..1113556)
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AA seq
500 aa
AA seq
DB search
MLKIKSFKFAQLALLFSCACSTSVFANQESLPTPIIDTVQEADLLTRQQLELETKAIEAQ
LAAEKKLEEERLAAEKQALAEQTLTDKLGQIELQFKSTVAKIYADNDFQLLWQDKATEQQ
FLREYAALVLSGISKQASTILEHIDSTSEGSFERDALLTDTFLDYMYYANNVSKSAQKWL
YSANNYKPALPRDEQIHAWLSAVAMGKSADFLTSLSTQNPLYRQTIAQLPSLFNAEGMDN
DKLAQLYKIAINAQRLRVIPAFDNGLFVNIPSYQLHYYRDGKLILTSKVIVGKKARKTPV
LYSKLSDVVVNPPWNTPTRLINEDIIPRVRKDPSYIYRNGYTIIDSKGKTIDPYTIDWEN
MTAKKFPYRLRQAPGDSALGNFKFNMPSSDAIYLHDTPSRGLFAKKDLALSSGCVRVEKA
DELASVLLKEAGWSEERKVNTVKSRKTISVNVASNNPVFLYYVTAWVNNGKTHTLPDIYG
YDVTPNLSYINWAIVKKYLN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagataaaatcatttaaatttgcacaattagccttgctgttttcttgtgcttgt
tcaacgagcgtattcgctaatcaagagtcgttgcctactccaattattgatacggtacaa
gaggccgatcttttaacacgtcaacagcttgagttagaaactaaagccattgaagcgcaa
ttagcggcagaaaagaaactggaagaggaacgtcttgcagcagaaaaacaagcgctcgca
gaacaaacattaacggataagttagggcaaattgaattacaatttaagtcaactgttgcg
aaaatttatgcagataatgatttccaattactttggcaagataaggcaacggaacaacaa
ttcttacgtgagtatgctgcgttagttctcagtgggatttctaaacaagcttccacgatt
cttgaacatattgactcgacgtcagaaggtagctttgaacgtgatgcattactcaccgat
acctttttagattacatgtattatgccaacaatgtgagtaaatccgcacaaaaatggtta
tatagcgcgaataactataaaccagcattacctcgtgatgaacagattcatgcatggtta
tctgctgttgcaatggggaaaagtgcggactttttaacgtcactttcaacacaaaatcca
ttatatcgtcagacgatagcgcagctaccttctttatttaatgcagaagggatggataat
gataagctggcacaattatataaaattgcaattaatgcccaacgtttacgtgttattcct
gctttcgacaatggcttatttgtcaatattccaagctaccaattgcattattatcgtgat
ggtaaactgattttgacctctaaagtaattgtcggcaaaaaagcgcgtaaaacccctgta
ctttacagtaaattaagtgatgttgtcgtgaatccaccttggaacaccccgacacgtttg
attaatgaagatatcattccacgtgtacgtaaagatccaagttatatctatcgtaatggt
tatacgattattgacagtaaaggaaaaactatcgatccttatacgattgattgggaaaat
atgacggcgaaaaaatttccttaccgtttacgtcaggcaccgggagacagtgcattaggt
aactttaagtttaatatgccaagttcggatgccatctatttgcacgatacaccaagcaga
ggcttgtttgcgaagaaagatttagcattaagctcaggctgtgtccgagtagaaaaagca
gatgaattagctagtgtgcttttaaaagaggcgggctggagtgaagaacgtaaagtgaat
actgtaaaaagtcgtaaaacgatctcagttaatgtggcttcgaataatccggtctttcta
tattatgtgaccgcatgggtcaacaatggtaaaacacatactttacctgatatttatggt
tatgatgtcaccccaaatttaagctacattaattgggctatcgttaaaaagtatttaaat
taa
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