Pasteurella multocida subsp. multocida HN06: PMCN06_1120
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Entry
PMCN06_1120 CDS
T01776
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmv03016
]
PMCN06_1120 (rnb)
Enzymes [BR:
pmv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PMCN06_1120 (rnb)
Transfer RNA biogenesis [BR:
pmv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PMCN06_1120 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF2274
Motif
Other DBs
NCBI-ProteinID:
AFF24362
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All DBs
Position
1216292..1218268
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AA seq
658 aa
AA seq
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MFQNNPLLSQLKQQIRDSKQQVEGIVKGSDKSFGFLECDKKSYFIPPAAMKKVMHGDKIK
ALIEVVGEKEQAEPDALIEPMLTRFIACVRFNKDKKLQVLVDHPQINQAIGAAQDKSITE
TLQEGDWVLATLKTHPLRDDRFFFAQIQQFICRAEDELAPWWVTLARHGQSRYPVQGCAD
YPMIDQHTREDLTALHFITIDAETTLDMDDALYLEPIHQAEEQIGWRLVVAVADPTAYIP
LDSQIEQEARQRCFTNYLPGFNIPMLPPELSDERCSLMQDEIRPALVCYIETDLTGNITE
KPRFVSAYVQSKAKLAYDHVSDYLENCLDAWQPENPQIAQQIQWLHQFTQARIEWRKQHA
LLFKEKPDYSFILAENGSVQAIQAQYRRIANQMVEECMILANICAAHYLDEHAKCGIFNT
HSGFDKKYLESAHQFLLNQLSDETNQAVLATRYSVANLTTLAGYCQMRHDIELLNSDYLE
LRLRRFLTFAEFKSEIAPHFGLGLSGYATWTSPIRKYSDMVNHRLIKAVLTQQTCEKPQD
DLFVRLQEARRQNRLVERDIADWLYCRYLATQVEQKPTFQAEIQDVMRGGLRVQLLANGA
PMFIPASLIHDNKEAIQVNTDTLTLSIQGEVKYKLGDIIQVQLLDVKEETRSIVGTLC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaataatcccctcctttcacaattaaaacaacaaatccgagacagcaaacaa
caagtcgaaggtatcgtaaaaggttcagataaatcctttggttttcttgagtgtgataaa
aaaagttactttattccccctgctgcgatgaagaaagtcatgcatggtgacaaaatcaaa
gccctgattgaagtcgttggtgaaaaagaacaagccgaacccgatgccttaattgagcca
atgctcacccgctttatcgcgtgtgtgcgtttcaataaagataaaaaattacaagtgctc
gtcgatcatccacaaatcaatcaagccattggtgctgcccaagataaatcaataacagaa
acgttacaagaaggggattgggtccttgctactttaaaaacacacccattacgtgatgac
agattctttttcgctcaaattcagcaatttatttgccgtgcagaagatgaactcgcgcct
tggtgggtcacgctagcacgtcatggacaatcgcgttatcctgtgcaaggttgtgcagat
tatccaatgatagatcaacatacacgtgaagatttgaccgcattgcattttatcaccatt
gatgcggaaacgacgttggacatggatgatgcgctttaccttgagcctattcatcaagcg
gaggaacagattggttggcgtttagtggtcgccgttgctgatccaactgcttatatcccg
cttgattcacaaattgaacaagaagccagacaacggtgttttaccaattatctaccgggc
ttcaacattccaatgttaccaccggaattgtctgatgaacgttgttctttaatgcaagac
gaaattcgtccggcgttggtctgctatatcgaaaccgatttaaccggtaatatcactgaa
aaaccgcgctttgtttccgcttatgtacaatccaaagcgaaattagcctatgatcacgtc
tctgattatttagaaaattgtcttgatgcatggcagcctgaaaatccacaaatcgcacaa
caaatccaatggcttcatcaatttactcaagcacgcatcgagtggcgtaaacaacatgct
ttgttatttaaagaaaagccagactattcgtttatcttagcggagaatggcagcgtacaa
gccattcaagcgcaatatcgtcgcattgcgaatcaaatggtagaggaatgtatgattctc
gccaacatttgtgctgcacactatctcgatgaacatgctaagtgcggtatttttaatacg
cattctggttttgataaaaaatacctagagagtgcacatcaatttttattaaatcagtta
agtgatgaaacaaaccaagccgtcttagcaacacgttattctgtagcgaatttaacaaca
ttagcgggctattgccaaatgcgccatgatattgagttattaaatagtgactatctcgaa
ttgcgtttacgtcgtttcttaacatttgctgaatttaaatctgaaatcgcaccgcacttt
ggtttaggcttatcgggttatgcgacctggacatccccgattcgtaaatattccgatatg
gtcaatcatcgcttaattaaagctgtgttaacccaacaaacttgtgagaaaccgcaagat
gacctgttcgtacgtttgcaagaagcgcgtcgtcaaaaccgtttagtagagcgtgatatt
gcagattggctttattgtcgttatttagcaacacaagtggaacaaaaaccaacattccaa
gcggaaattcaagatgtgatgcgagggggattacgtgtgcaactgcttgctaatggtgcg
ccgatgtttatccctgcctccttaattcacgacaataaggaagcgattcaagtcaatacg
gatacgcttactctgtctattcaaggtgaagtgaaatataaattaggagatatcattcag
gtgcaactcttggacgtgaaagaagaaacgcgtagtattgtcggcactctttgttaa
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