Pasteurella multocida subsp. multocida HN06: PMCN06_1509
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Entry
PMCN06_1509 CDS
T01776
Symbol
rfaL
Name
(GenBank) RfaL protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv00540
Lipopolysaccharide biosynthesis
pmv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PMCN06_1509 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pmv01005
]
PMCN06_1509 (rfaL)
Enzymes [BR:
pmv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
PMCN06_1509 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
pmv01005
]
Core region
PMCN06_1509 (rfaL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF6223
Motif
Other DBs
NCBI-ProteinID:
AFF24739
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All DBs
Position
complement(1590924..1592177)
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AA seq
417 aa
AA seq
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MQSLKKSSLYVLSINFIIFIFFPTLFLVKGGHNIASVGLCGIALIYFLISRLLNREELDS
LPRAEKIWMLCLLFYSATFLLSFFWHAEKLRELEHIAKLCLFIPLLYLFERYQPHINWLL
KGILFGAIIAGGVAIYDRFILNVYAAYSPRMLQIQAGDIAMSLGLFSFVIGLHSFSRQQY
RQMLWAIIATLFGILGSVLSTARGGWIGLPLLLCFALFAYRQYLSKKILFFVSLFFVFLL
AAVAFAPKTKLISRVTEAYTEAQQYFDAQAEQSTSIGARFALWKSALLMAKEKPLLGWGN
AGAMEKRQVQQQEGVISEYAANFTHAHNQYLDNLSKYGLVGLVALLAIFSVPFCYFYRKR
HAIKSEEKLVATLGMLHIISVMCYSLTQAFLNHNSGNIFYFLSVFIFYGCLKHSEKE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcttaaaaaaatcttctttatatgtattgagtataaattttattatttttatc
ttctttcccacgctttttcttgtaaaaggtgggcataatattgcctctgtcgggttatgt
ggcatcgcactcatttacttcttgatttctcgtctgcttaacagagaagagcttgactca
ctgcctcgtgcagaaaaaatctggatgttatgtcttcttttttatagtgcaacgttttta
ttgtctttcttttggcatgctgaaaagctaagggaactcgaacatattgctaagttgtgc
ctgtttatcccattgttatatttatttgaacgttatcaacctcatatcaattggctactt
aagggaattttattcggtgcgataattgcaggcggtgtggcgatttatgatcgctttatc
ttaaatgtttatgcggcgtattcaccgcgtatgttacagattcaagcgggcgatattgcc
atgtctttaggtctgttttcgtttgtgattggtttgcattcgtttagtcgacagcaatat
cgtcagatgttgtgggcgattattgcgacgttattcgggatacttggtagtgtgttatcg
acggctcggggtggttggattggcttaccgctgctgttatgttttgcgttgtttgcttat
cgtcagtatttatcgaaaaaaattctcttttttgtgagtttgttttttgtgtttctgttg
gcagctgttgcattcgcccctaaaacaaagttgatttctcgtgtgacagaagcatatacc
gaagcacaacaatattttgacgcacaagcagaacaatcgacctcgattggcgcgcgtttt
gcgttatggaaaagtgcattgcttatggcaaaagaaaaaccactattaggttggggaaat
gcgggagcgatggagaaacgtcaagtgcagcaacaagaaggggtgataagtgaatatgcc
gccaattttacccatgcacacaatcaatatttggataacctgtcaaaatatggtcttgta
gggttagttgcattactggcgatttttagtgtgccattttgttatttttatcgaaaacga
catgccataaagagtgaggaaaaattagtggcaacattaggtatgcttcatattatttca
gtgatgtgctattccttaactcaagcctttttaaaccataattccggtaatattttttat
ttcttatcggtttttattttctatggctgtttaaaacacagtgaaaaggaataa
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