Pasteurella multocida subsp. multocida HN06: PMCN06_1647
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Entry
PMCN06_1647 CDS
T01776
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PMCN06_1647 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmv03021
]
PMCN06_1647 (rpoA)
03400 DNA repair and recombination proteins [BR:
pmv03400
]
PMCN06_1647 (rpoA)
Enzymes [BR:
pmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PMCN06_1647 (rpoA)
Transcription machinery [BR:
pmv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PMCN06_1647 (rpoA)
DNA repair and recombination proteins [BR:
pmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PMCN06_1647 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
BetaGal_dom3
RepSA
Motif
Other DBs
NCBI-ProteinID:
AFF24875
LinkDB
All DBs
Position
complement(1757201..1758190)
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVFLTLNKSGIGPVVAADITHDGD
VEIVNPEHVICHLTDESASINMRIRVQRGRGYVPASARVHAQDEERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIELETNGTIDPEEAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaagccacgcttagttgatattgagcaaattagc
tcaactcatgctaaagtgatcttagaaccgttagagcgtggattcggccacactttaggt
aatgcattgcgtcgtattcttctatcttcaatgccaggttgtgctgtaactgaagtagaa
attgatggcgtattgcacgaatacagcagtaaagaaggggttcaggaagatattcttgaa
gtacttctaaacttaaaaggcctagcggttaaagttcagaataaagatgatgtatttctg
acattaaacaaatctggaattggccctgttgttgcagctgacatcacccatgatggagat
gttgagatcgtaaatcctgagcacgttatctgtcatttgactgacgaaagcgcatcaatt
aatatgcgcattcgcgttcaacgtggtagaggttatgtacccgcatcagcgcgtgtgcat
gctcaagatgaagaaagaccaattggtcgtctattagtagatgcttgttacagtccagta
gaccgtattgcttacaatgttgaagcagcacgtgttgaacaacgtactgacttagataaa
ttagttattgagttggaaactaacggcactattgatccagaagaagcaattcgtcgtgca
gcaacaattttagcagagcaactagatgcgttcgttgatttgcgtgatgttcgtcaacca
gaagttaaggaagaaaaaccagaattcgatccaattctgttgcgtcctgttgatgactta
gagttgacagttcgttctgctaactgtttgaaagcagaaacaattcactatatcggtgat
ttagtacagcgtactgaagttgaattattaaaaacacctaatcttggtaagaaatcactt
actgaaattaaggacgttcttgcttcacgcggcttatcactaggtatgcgccttgaaaat
tggccaccagcaagtattgctgaagactag
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