Pasteurella multocida subsp. multocida HN06: PMCN06_1741
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Entry
PMCN06_1741 CDS
T01776
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmv03032
]
PMCN06_1741 (gyrB)
03400 DNA repair and recombination proteins [BR:
pmv03400
]
PMCN06_1741 (gyrB)
Enzymes [BR:
pmv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PMCN06_1741 (gyrB)
DNA replication proteins [BR:
pmv03032
]
Prokaryotic type
DNA Topoisomerases
PMCN06_1741 (gyrB)
DNA repair and recombination proteins [BR:
pmv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PMCN06_1741 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AFF24969
LinkDB
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Position
complement(1849323..1851743)
Genome browser
AA seq
806 aa
AA seq
DB search
MSNNTPENYGANSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYA
KDITVTIHTDNSVSVQDDGRGIPVDIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLH
GVGVSVVNALSDKLQLTIRRQGKVHEQIYHLGEPQAPLAAIGETDQTGTAVRFWPSPTIF
NNIEFEYDILAKRLRELSFLNSGVSIKLFDKRNDRQDHFHYEGGIQAFVEYLNRNKNPIH
QKPFYFSTEKDGIGVEVSMQWNDSFNENVYCFTNNIPQRDGGTHLAGFRGALTRSLNNYM
DNEGHNKKSKVATSGDDAREGLVAIISVKVPDPKFSSQTKDKLVSSEVKSAVESVMNEYL
QQYLLENPSDAKIIVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQERDPAL
SELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCG
IGRDEYNPEKLRYHSIIIMTDADVDGAHIRTLLLTFFYRQMPELIERGHVYIAQPPLYKV
KKGKQEQYIKDDEAMVQYEVALALENAALYVNENAPAMSGLALESLVSEYNAVQKMIGRL
TRYYPEVVLKELIYHPELTSELMADQKEVENWIATLVDKLVAKESNGNHYSYRTVFNSER
HLHEAVLTVRTHGIDTDYFLNFQFATGSEYARIVKLGKQLTGLIEEGAYIMRGERKLEVS
SFEQAIEWLVKESRRGLMVQRYKGLGEMNPEQLWETTMDPNARRMLKVSIKDAVAADLLF
TTLMGDEVEPRREFIESNALHANLDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataatacccctgaaaattatggtgcgaatagtattaaagtcttaaaaggactt
gatgccgtgcgtaaacgtcctggtatgtacattggggatacggatgatggtacgggttta
catcacatggtgttcgaagtcgtggataattccattgacgaagctttagcgggctatgct
aaggatataacagtcaccattcacaccgataattcggtgtctgtacaagatgatggtcgt
ggtattcctgttgatattcacccagaagaaggggtttcggctgctgaagtcattatgacg
gtattacatgcaggcggtaagtttgatgataattcgtacaaagtctcgggcggtttacat
ggtgtaggggtgtcagtggttaatgccctttccgataaattgcaattaactattcgtcgt
caaggcaaagtgcatgaacaaatttaccatttaggtgaacctcaagcaccattagccgcg
attggtgaaacggatcaaactggaactgccgtgcgtttctggccgagtccaaccattttc
aataacatcgaattcgaatacgatattttggcaaaacgcttgcgtgaattgtctttctta
aattcaggtgtgtcgattaaattatttgataagcgcaatgacagacaagatcattttcat
tatgaaggtggcattcaagcgtttgtagaatacctaaaccgtaacaaaaatccgattcat
caaaaacctttctatttttcgacagaaaaagacggcattggggtggaagtgtcaatgcag
tggaatgatagctttaacgaaaacgtgtattgtttcaccaataatattccacaacgtgac
ggcggtacgcacttagcgggtttccgtggtgccttaactcgtagtttaaataactacatg
gataacgaaggtcataataaaaaatcgaaagtggcgacttcgggtgacgatgctcgagaa
ggtttggtagcgattatttcggtcaaagtacctgatcctaaattctcctcgcaaacgaaa
gacaaattagtgtcttcggaagtgaaaagtgcggtggaatcggtgatgaatgaatattta
caacaatatttattagaaaacccgtccgatgccaaaatcattgttggtaaaatcattgat
gctgcccgtgcgcgtgaagctgcacgtaaagcccgtgaaatgacacgccgtaaaggtgca
ttagatttaggtggcttgccgggtaaacttgctgactgccaagagcgtgatcctgcatta
tcggaattatacctcgtggagggggattctgcgggcggctcagcaaaacaagggcgtaat
cgtaaaaaccaagccattttaccgttaaaagggaaaattctgaacgtagaaaaagcccgt
tttgacaaaatgctttcttctgctgaagtggggacattaatcaccgcactgggttgtggg
attggtcgtgatgaatataatccagaaaaattgcgttatcacagcattattatcatgacc
gatgcggatgtggatggtgcgcacattcgaaccttattattaactttcttctatcgtcaa
atgccagagttgattgaacgtggtcatgtgtatattgcgcaacccccactttacaaagtg
aaaaaaggcaaacaagagcaatatatcaaagacgatgaagctatggtgcaatatgaagtc
gcacttgcgttagaaaatgcggcactgtatgtcaatgaaaatgctcccgctatgagtggc
ttggcgttagaaagtttagtgtcagaatataatgcagtacaaaaaatgataggtcgctta
actcgctattatccagaagtggtgttaaaagaattgatttatcatccagagttaaccagt
gaattaatggcagatcaaaaagaagtggaaaactggattgcaaccctcgtcgataaactg
gtggcaaaagaaagcaacggtaaccattatagctatcgtactgtgtttaacagcgaacgt
catttacatgaggcggtgttaacggttcgcacacatgggattgatacggattatttcctt
aacttccaatttgcgacaggcagtgaatatgcccgcatcgtgaaattaggcaaacaatta
accggtttaattgaagaaggcgcttatatcatgcgtggtgagcgtaaactggaagtgagt
tcatttgaacaagcgattgaatggttagtgaaagagtcgcgtcgtgggttaatggtacag
cgctataaaggattgggggaaatgaatccagaacagctttgggaaaccacaatggatcca
aatgcacgtcgtatgttaaaagtttcgattaaagatgcggtggcggcagacttactgttt
accactttaatgggtgatgaagtcgagccacgtcgtgaatttatcgaaagcaacgcatta
catgcaaatttagatatttag
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