Pasteurella multocida subsp. multocida HN06: PMCN06_1834
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Entry
PMCN06_1834 CDS
T01776
Symbol
miaB
Name
(GenBank) MiaB family RNA modification enzyme
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmv03009
]
PMCN06_1834 (miaB)
Enzymes [BR:
pmv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PMCN06_1834 (miaB)
Ribosome biogenesis [BR:
pmv03009
]
Prokaryotic type
ribosomal protein modification factors
PMCN06_1834 (miaB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Methyltransf_2
YajR_YAM
CLP1_P
ACP_syn_III
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AFF25062
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Position
complement(1950797..1952137)
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AA seq
446 aa
AA seq
DB search
MTSSLPNIGFISLGCPKNLVDSERILTELRSDGYNIIPSYENADLVIVNTCGFIDSAVQE
SLEAIGEALEENGKVIVTGCLGAKEDRIREVHPKVLEVTGPHSYEAVMQQVHKYVPKPAY
NPYVNLVPKQGVKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLDSRSITQVLDEAKRLV
EAGVKEILVVSQDTSAYALDRSKEEQNKTVFWNGMPIKNNLISLCEQLGKLGVWVRLHYV
YPYPHVDQLIPLMAEGKILPYLDIPLQHASPKILKAMKRPGSIERTLERIKKWREICPDL
TLRSTFIVGFPGESEEDFQLLLDFLKEAQLDRVGCFKFSPVEGAIATEMPDQVPEEVKEA
RFHRFMQLQQEISAARLQQKVGKVFTVLVDEVDEEGIIARSIADAPEIDGVVYIDNPNRV
AVKAGQFIEVKITRADAYDLYASLIN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttctttacccaatattggttttattagtctcggttgccctaaaaatttagta
gattctgaacgtattctgacggagttacgttcagatggttacaatattattccaagttat
gaaaatgcggatcttgtcattgtcaacacttgtggttttattgacagcgcagtacaagaa
tccctcgaggcgattggcgaagcgctggaagaaaatggcaaagtgattgtgacgggttgc
ttaggtgccaaagaagatcgtattcgcgaagtccacccgaaagtgttagaagtaacaggt
ccacatagttacgaagctgtcatgcagcaagtacataaatatgtgcctaagcctgcctat
aatccgtatgtcaatcttgtacccaaacaaggtgtaaaactgacaccaaaacattatgct
tatttaaaaatctcagaaggctgtgatcatcgttgtaccttctgcattattccttccatg
cgtggtgacttagacagtcgttccattacacaagtattagatgaagcaaaacgccttgtt
gaagcgggagtaaaagaaatcttggtcgtttcacaagatacttctgcttatgcgttagat
cgtagcaaagaagaacaaaataaaacggtattctggaatggtatgccaattaaaaataac
ttaattagcctctgtgagcaactgggtaaactcggtgtgtgggtacgcttacattatgtt
tacccttacccacatgttgatcaattaattccattaatggcggaaggcaaaatcctgcct
tatttagatattcccttacaacatgctagccctaaaatcttaaaagccatgaaaagaccc
ggttcaattgagcgcaccctagaacggatcaaaaaatggcgtgaaatctgtcctgatctc
acattacgctcaacctttattgtcggatttccgggtgaaagcgaagaagattttcaactt
cttttagatttcttaaaagaagcccaacttgatcgcgttggctgtttcaaattcagccca
gtagaaggcgctattgcaacagaaatgcccgatcaagtcccagaagaggtgaaagaagca
cgttttcaccgctttatgcagttacaacaagaaatctctgcagcgcgcctacaacaaaaa
gtaggcaaggtcttcactgtgctcgtggacgaagtagatgaagaaggcatcattgcacgt
tccatagcagatgcaccagaaatagatggtgtggtttacattgataatccaaatcgagtg
gctgttaaagcgggacaatttattgaagtcaagatcacacgggctgacgcctacgatctt
tacgcgtcgctaataaactag
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