Pasteurella multocida subsp. multocida HN06: PMCN06_2154
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Entry
PMCN06_2154 CDS
T01776
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmv
Pasteurella multocida subsp. multocida HN06
Pathway
pmv00300
Lysine biosynthesis
pmv00470
D-Amino acid metabolism
pmv01100
Metabolic pathways
pmv01110
Biosynthesis of secondary metabolites
pmv01120
Microbial metabolism in diverse environments
pmv01230
Biosynthesis of amino acids
Module
pmv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PMCN06_2154 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PMCN06_2154 (dapF)
Enzymes [BR:
pmv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PMCN06_2154 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
GvpH
Motif
Other DBs
NCBI-ProteinID:
AFF25375
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All DBs
Position
2262155..2262979
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFVVVDAITQNLYFSPETIKRLADRHRGIGFDQMLIVEPPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVTLKGLTDKKDIAVSTQTGKMILSIKDDGMIRINMGE
PIWEPAKIPFTANKFEKNYILRTSIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLLE
NHERFPERVNAGFMQVIHRGHIKLRVYERGAGETQACGSGACAAVAVGVMQGLLDSKVQV
DLPGGSLIIEWEGVGKPLFMTGDATHVYDGVIRL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttccaaaatgcacggcttaggtaatgattttgtagtagtggatgccattaca
caaaacctctatttttctccagaaaccattaagcgtttggcagaccgccatcgtggtatt
ggttttgaccaaatgttgatcgttgaaccaccatatgatcctgatctcgattttcattat
cgcatttttaatgcagatggcagtgaagtgtcgcaatgcggtaatggtgcacgttgtttt
gcccgttttgtgacgttgaaagggttgaccgataaaaaagacattgcggtcagtacgcaa
acaggcaaaatgattttatcaattaaagatgacggcatgatccgcattaatatgggagag
ccgatttgggaacctgcgaaaatcccctttactgccaataaatttgaaaaaaactatatc
ttacgtacctctattcagacggtgttatgtggtgccgtgtcgatgggcaatccccattgt
gtagtgcaagtggacgatattcaaactgccaatgttgagcaattaggacctttattggaa
aaccacgaacgttttccagagcgcgtaaacgctggttttatgcaagtgattcatcgagga
catattaaactacgtgtgtacgagcgaggcgctggtgaaacccaagcttgcggtagtggc
gcctgtgctgcggtggcagtgggtgtgatgcaaggattattggacagtaaagtgcaagtg
gatcttccaggtgggagcttgattattgagtgggaaggcgtaggtaaaccattatttatg
acaggtgatgcgacacacgtgtatgatggagtgattcggttatag
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