Paenibacillus mucilaginosus K02: B2K_01955
Help
Entry
B2K_01955 CDS
T02041
Name
(GenBank) ricin B lectin
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw00040
Pentose and glucuronate interconversions
pmw01100
Metabolic pathways
pmw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B2K_01955
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B2K_01955
Enzymes [BR:
pmw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B2K_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AFH59500
UniProt:
I0BAV3
LinkDB
All DBs
Position
complement(460021..461445)
Genome browser
AA seq
474 aa
AA seq
DB search
MKSKSLLKVLTAASLIVSAMPLMSASAADPALVPYNLTGFSAGNTGGGSIPETDTARYKK
VYNAADLAAALKRGSGVKVVEIMNDLNLGWNELPAEAKISPFTAHSTPLTHPVLKTTGVS
KLTVDGFNGLTIFSANGAKIKHGAFVFKRSSNVIIRNLEFDELWEWDEYTKGDYDKNDWD
YVTLEENSKVWIDHCTFNKAYDGLVDVKKGTNGVTISWSTFKGDDGSAGSWVRKQIDAME
ANPSAYPMYAYLRSSAIGLTKEDIIAVAASQKKGHLMGATEFDSLNPNLQVTLHHNYYKD
IQDRMPRLRGGNAHAYNIVMDSAAAYAAKKKITTAMETALKSKGYKFGVTSNGAISTEGG
AVLVEKSEIIDVASPVRNNQTDPADSSYTGKIRVLDTLYSLNGTSFRGGSDTSGSPLAPV
PAPVIAFSWNGFSTLPYSYTAEDPATLKARLTASNGAGAGKLIWSKDNWLKTSY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaagtccttgttgaaagtgcttacggccgcatcgctcatcgtctccgccatg
cccctgatgtccgccagcgcggcggacccggctctcgtcccgtacaatctgaccgggttc
tcggccggcaataccggaggcggcagcatcccggagaccgacacggcccgctacaagaag
gtatataacgcggctgatcttgccgctgcactgaagcggggctccggtgtcaaggtggtc
gagatcatgaacgacctgaacctcggctggaacgagctgccggccgaagcgaagatctcc
ccttttacagcgcacagcacgcctctgactcatcccgtgctcaagacgacaggggtgagc
aagcttacggttgacggcttcaacggactgacgatcttctcggcgaacggggccaaaatc
aaacacggcgcattcgtcttcaaacgcagctctaacgtgatcatccgcaacctggaattc
gacgagctgtgggagtgggacgagtatacgaagggcgactacgacaagaacgactgggat
tatgtcaccctggaggagaacagcaaggtatggatcgaccactgcacgttcaataaagcc
tacgacggcctcgtcgatgtcaaaaagggcacgaacggcgtcacgatctcctggtccact
ttcaagggcgacgacggcagcgcaggcagctgggtccgcaagcagatcgacgcgatggaa
gcgaatccgtccgcttacccgatgtacgcatacctgcgcagcagcgcgatcggtctgacc
aaggaagatattattgcagttgccgcctcccagaaaaaaggccatctcatgggcgccacc
gagttcgactccctgaatccgaacctccaggtaacgctccaccataactattacaaggat
atccaggaccggatgccgcggcttcgcggaggcaacgcccatgcgtataacatcgtgatg
gacagcgcggctgcctacgccgcgaagaagaagattacgacagcgatggaaaccgctctg
aagtccaagggatacaagttcggcgtaacgagcaacggcgccatctccacggaaggcggg
gcggtgcttgtcgagaagtcggagatcattgacgtggccagccccgtacgcaacaaccag
accgatccggccgacagcagctacaccggcaaaatccgggtgctcgacacgctctactcg
ctgaacggcacttcgttccgcggcggcagcgacacctcgggctccccgctcgctcctgtg
ccggcaccggtcattgctttctcctggaacggcttctccacgctgccgtacagctacacc
gccgaggacccggcgaccctgaaggccagactgacggcatcgaacggcgcaggcgccggc
aagctgatctggtcgaaggacaactggctgaagacgagctactag
DBGET
integrated database retrieval system
