Paenibacillus mucilaginosus K02: B2K_09710
Help
Entry
B2K_09710 CDS
T02041
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2K_09710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmw03019
]
B2K_09710
03009 Ribosome biogenesis [BR:
pmw03009
]
B2K_09710
Enzymes [BR:
pmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B2K_09710
Messenger RNA biogenesis [BR:
pmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B2K_09710
Ribosome biogenesis [BR:
pmw03009
]
Prokaryotic type
rRNA helicases
B2K_09710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFH60994
UniProt:
I0BF47
LinkDB
All DBs
Position
2169914..2171527
Genome browser
AA seq
537 aa
AA seq
DB search
MKTFSEFGLEPKVLRAITEMGFEESTPIQEKAIPVALEGRDLIGQAQTGTGKTAAFGIPL
VNKIDVKEEKIVALIMCPTRELAIQVAEEIEKLGRFKGIRSLPIYGGQDIVKQIRGLRKK
PQIIIGTPGRLLDHINRKTIKLDDVQTVILDEADEMLDMGFMDDIKSILSLVPEERNTML
FSATMPVNIQKLAQQFLKDPEHVSVIPKQVSAPLIDQAYIELHERQKFEALCRLIDMEAP
ELAIIFGRTKRRVDELSEALQKRGYAAEGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGAAYTFVTPREIDHLHFIEKITR
HRITKKPIPSLAEAIEGKQKVTAERVLDVLQKDEHNEYKGLAISLLEHHDSVHLLAAALK
LLTGGDKKEVDIELTPEDPIRAKKRRPDVRSNGRRPSGSYGTAGGARRNDRPYGGGGREG
GGYRGNREGGRREGGSYGGGSREGGYRGSRDGGGYRGNRDGGSNYSRPSNRSEETLV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacatttagcgaatttggcctagagcctaaggtactgcgcgccatcacggagatg
gggttcgaggaatccacacccatccaggagaaagccattcctgtagcccttgaaggccgt
gacctgatcggccaggcgcagaccggtacagggaagaccgctgctttcggtatcccgctg
gtgaacaagatcgacgtgaaggaagagaaaatcgtcgctctgatcatgtgtcctacgcgc
gagctggctatccaggtcgcggaagaaatcgaaaagctcggacgcttcaaaggcatccgt
tccctgccgatctacggcggacaggacatcgtgaagcagatccgcggcctgcgcaagaag
ccgcagatcatcatcggtacgccgggacgtctcctcgaccatatcaatcggaagaccatt
aagctggatgacgtgcagaccgtcattctcgatgaagctgacgaaatgcttgatatgggc
ttcatggatgacattaagtccatcctgagccttgttcctgaagagcgcaacacgatgctg
ttctcggccaccatgcccgtcaacatccagaagctggcccagcagttcctgaaggatccg
gagcatgtctcggtcattcctaagcaggtttccgctcctctgatcgaccaagcttacatc
gagctgcacgagcgtcagaagttcgaagcgctctgccgcctcatcgatatggaagctcct
gagcttgccatcatcttcggccggacgaagcgccgggtggatgagctttccgaagccctc
cagaagcgcggttatgcggcagagggcctgcacggcgacctgtcccagaaccagcgtgac
aacgtgatgcgcaaattccgtgacggcagcatcgacgtgctcgtagctactgacgtagcg
gcacgcggtctcgacgtatcgggcgttacgcacgttatcaactttgaccttccgcaggat
ccggagagctatgttcaccggatcggccgtacgggccgtgcgggcaaggaaggcgcagct
tataccttcgttacgccgcgcgagatcgatcacctgcacttcatcgagaagatcacgcgt
caccgcatcacgaagaagcctataccaagcctggcggaagccatcgaaggcaagcagaag
gtaacggctgagcgcgtcctggatgttctccagaaagacgagcacaacgaatacaagggt
ctggccatctccctgctcgagcatcatgattccgtgcatctgcttgcagcggctctcaag
ctgctgacgggcggagacaagaaggaagtcgatatcgagctgacaccggaagatccgatc
cgtgcgaagaagagaagaccggatgtgcgcagcaacggtcgtcgtccttccggctcttat
ggtacggcaggcggcgctcgccgtaatgaccgtccatacggcggcggcggacgcgagggc
ggcggctaccgcggcaaccgcgaaggtggacgccgtgaaggcggaagctatggcggcggc
agccgtgagggcggataccgtggcagccgtgacggcggcggctaccgcggcaaccgtgac
ggcggcagcaactactcccgtccgtcgaaccggagcgaagaaacactggtataa
DBGET
integrated database retrieval system
