KEGG   Paenibacillus mucilaginosus K02: B2K_14005
Entry
B2K_14005         CDS       T02041                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pmw  Paenibacillus mucilaginosus K02
Pathway
pmw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B2K_14005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmw03019]
    B2K_14005
Messenger RNA biogenesis [BR:pmw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B2K_14005
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AFH61815
UniProt: I0BHG8
LinkDB
Position
complement(3238887..3240563)
AA seq 558 aa
MSSEQERTLSVMALGGVGEIGKNMYVIQYGDDIIAIDCGSKFPDESLPGIDLIVPDISYL
LENRDKVRGIIITHGHEDHIGGLPYILKQMGMPVYGTRLTLGLIEGKLKEQGLLGSTKTH
VITEDSTLQLGAFTVTFFKTNHSIPDCIGVVFETPEGTVVHTGDFKFDLTPVNEESADLH
RMAEIGKSGVLALLSESTNAERPGFTPSERKVGLHLEEVFRKAQQKVFIATFASNVHRLQ
QVVDAAFATGRKLSLIGRSMVNVVSIAAELGYMNIPDGMLIDPGEVGQYSPDKVAILCTG
SQGEPMAALARLARNNHRQVEVLRGDTIIVSATPIPGNERNVSRTVDDLYRLGAHVIYGP
GSSTGMHVSGHASQEELKLMLHLMRPQYFIPIHGEYRMLHQHRQLAEAVGVESENIFIVD
NGDVVEFQNGRGRKAGKVPAGSTFVDGLGIGDIGHMVLRDRKSLSQDGILIVVITMSKAT
GTVLSGPDIVSRGFVYVRESESLMEQANGIVVRTLAKLQEENVNQWNIVKQKIKDALGKF
LYDQTKRRPMILPIIVEV
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgagcagtgagcaggaacgcaccttatccgtcatggccctgggcggggtaggcgaaatc
ggaaagaacatgtacgtcattcaatacggagacgatatcatcgccatcgactgcggttcg
aagttcccggacgagagcctgcccggcatcgacctgatcgtccccgacatctcgtacctg
ctggagaaccgcgacaaagtcaggggcattatcatcacccacggccacgaggatcatatc
ggcggacttccgtatattctcaagcagatggggatgcccgtctacggtacccggctgacg
ctcgggctgatcgaaggcaagctgaaggagcaggggctgctcggctccacgaagacgcat
gttattacggaggactccaccctccagctcggagccttcaccgtgactttcttcaaaacg
aaccacagtatcccggactgcatcggggtcgtcttcgaaacgccggagggaaccgtcgtg
catacgggggatttcaaattcgacctgacgcccgtcaacgaggagtcggccgacctgcac
cgcatggcggagatcggcaagagcggcgtgctggccctgctctccgagagcacgaatgcc
gagcgcccgggcttcaccccttcggagcgcaaggtcggcctccatctcgaggaagtgttc
cgcaaggcgcagcagaaggtgttcatcgccactttcgcctcgaacgtccaccggctgcag
caggtcgtcgatgcggcttttgctacagggcgcaagctttcccttatcgggcgcagcatg
gtgaacgtcgtctccatcgccgccgagctcggctatatgaacattccggacggcatgctg
atcgatccaggtgaggtcggccagtattccccggacaaggtggcgatcctctgtacgggc
agccagggagaaccgatggccgccctcgcccgcctggcccgcaacaaccaccgccaggtg
gaggtgctgcgcggcgatacgatcatcgtctccgctacgccgattccaggcaacgagcgc
aacgtctcccgtacggtcgacgacctgtacaggctgggcgcccatgtcatctacggcccc
gggtcctcgaccgggatgcacgtgtccgggcacgccagccaggaggagctgaagctgatg
cttcacctgatgcggccgcagtattttattccgatccatggcgagtaccgcatgctccac
cagcaccggcagctggccgaagccgtcggcgtcgagagcgagaacatcttcatcgtcgat
aacggcgacgtggtggagttccagaacggccggggccgcaaggcgggcaaagtgccggcc
ggcagcacgttcgtcgacggcctcgggatcggcgacattgggcacatggtgctgcgcgac
cgcaagtcgctctcgcaggacggcatcctgatcgtcgtcatcacgatgagcaaggcgacg
ggcaccgttctctccggtccggacattgtctcgcgcggcttcgtgtatgtccgcgaatcc
gagagcctcatggagcaggcgaacgggatcgtcgtccgcaccctcgcgaagctgcaggaa
gagaacgtgaaccagtggaacattgtgaagcagaagattaaggatgccctcggcaagttc
ctgtacgaccagacgaagcgccgtccgatgatccttccgattatcgtggaagtgtag

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