Paenibacillus mucilaginosus K02: B2K_16895
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Entry
B2K_16895 CDS
T02041
Name
(GenBank) helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw03420
Nucleotide excision repair
pmw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B2K_16895
03430 Mismatch repair
B2K_16895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmw03400
]
B2K_16895
Enzymes [BR:
pmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B2K_16895
DNA repair and recombination proteins [BR:
pmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B2K_16895
MMR (mismatch excision repair)
Other MMR factors
B2K_16895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
DEAD
SLFN-g3_helicase
nSTAND3
Mg_chelatase
PhoH
NACHT
AAA_16
AAA_30
ResIII
AAA_11
DAXX_hist_bd
Motif
Other DBs
NCBI-ProteinID:
AFH62377
UniProt:
I0BJ30
LinkDB
All DBs
Position
complement(3850956..3853124)
Genome browser
AA seq
722 aa
AA seq
DB search
MESGLQQAYSEELERLESTIQEMEEQLSYLQGVPVYTGPDLTEQVLESIRDNKRRSLTQA
RPEPYFGRLDFQEAGKEGPQPLYIGKFGVEKADSPELLVVDWRAPVASLFYSFTGGSESA
QYESPDGTIEGLVYLKRNLVIRKQILQRVVDTFDREGDDPAVTDEFLLYRLGENKDNKLR
DIVSTIQAEQDAIIRAGKNHALVIQGVAGSGKTTVALHRLAYLLYHYRDQVKAEKMIIFA
PSRMFLDYISGVLPELGVGHIQQTTFADWALDLLEQEVALADPAERLRYWFGSGKNRPVI
DENAPGRFKGSIRFMQWLDRQLDAYEAAAVPQADFSPWEGARLPRRQIRTWYETEYKHEP
LMKRRERVLARIKRWTEMELEKVWQVHLKKDYKKKSSAKLREFGKQWTEYTPFSFYRELF
ADTPPAFAAGGEDAPHTFLPEDLRAETLKLAKKKKVQPEDLPALMYIRQRFYGIHGDLRF
DHTVIDEAQDFSPFQIALLSLHTKNGSFSILGDLSQGIHAYQGVHDWQELLSLFPEENRA
YYSLNRSYRSTMEIIYFANEVLKRGIADPASLAVPVFRSGEPVELLHTQEAEMPARLAAA
ISGHRAREGSGTLAVLARTEERCRDLHTALEAAGCSGVNLIVPGQQQYEGGVSIVPVYMA
KGLEFDSVLLTDVDPLHYAASPQDAKLLYVGCTRALHELKLLYSGEPSPLIAGVEGDFVR
HT
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
ttggaatccggtctgcagcaagcctacagcgaggaacttgaacgcctcgagagtacgatc
caagagatggaggagcagctctcttacctgcagggcgtgcctgtgtacacggggccggac
ctgaccgagcaggtgctggagtccatccgcgacaacaaacggcgcagcctcacccaggcc
aggcccgagccctacttcggacggctggactttcaagaggcaggcaaggaagggccgcag
cccttatacataggcaagttcggtgtggaaaaagcggactcgcccgagctgctcgtcgtg
gactggcgggcgccggtcgccagcctcttctattccttcacgggcggcagcgaaagcgca
cagtacgaatcgccggacggtacgatcgagggcctcgtctacctgaagcgcaaccttgtc
atccgcaagcagatcctgcagcgggtggtcgacacgttcgaccgggaaggcgacgatccg
gcggtaacggacgagttcctgctctaccggctcggcgagaacaaggataacaagctgcgc
gacatcgtatccacgattcaggcggagcaggatgcgatcatccgggcgggcaaaaaccac
gcactcgtcatccagggggtcgcgggaagcggaaagacgaccgtcgccctccatcgtctg
gcttaccttctctaccattacagagaccaggtcaaagcggagaaaatgattattttcgcc
ccaagccgcatgttcctcgactacatctcgggcgtgctgccggagctgggtgtcgggcat
atccagcagacgaccttcgcggactgggcgctggacctgctggagcaggaggtggcgctg
gccgatccggccgagcggctgcgctactggttcggctcagggaaaaaccgccccgtcatt
gacgagaacgcccccggccggttcaagggctccatccgcttcatgcagtggctggaccgg
cagctggacgcgtacgaggcggcggccgtgccgcaggccgacttctccccttgggaaggg
gcccggctgccccgccgccagatcaggacgtggtacgaaaccgagtacaagcacgagccg
ctgatgaagcgccgggagcgcgtgctggcgcggatcaagcgctggaccgagatggagctc
gagaaggtctggcaggtccacctcaagaaggattataagaaaaagtcctcggccaagctg
cgggagttcgggaagcagtggacggaatacacgccgttcagcttctacagggagctcttc
gccgatacgccgcctgccttcgcggccggtggagaggatgcgccgcacaccttcctgccg
gaagacctgcgcgccgagacgctcaagctcgcgaagaagaaaaaagtgcagccggaagac
ctcccggcgctgatgtatatccgccagcggttctacggcatccacggcgatctcaggttc
gatcatacggtcatcgacgaagcgcaggatttctcgccgttccagattgcgctgctctcg
ctgcatacgaagaacgggtccttctcgatcctaggagacttgtcccaaggcatccacgcc
taccagggcgtacacgactggcaggagcttctgtcgctgttccccgaggagaaccgggct
tactattcgctgaaccggagctaccgctcgacgatggagatcatctacttcgcgaacgag
gtgctgaagcgaggcatcgctgatccagcctccctggctgtcccggtgttccgcagcggc
gagccggtggagctgctgcacacacaggaagccgagatgcccgcaaggcttgctgcggcc
atctcgggccaccgcgcccgcgaagggtccggcacgctggccgtgctcgcccgcactgaa
gagcggtgccgcgacctgcacacggccctggaggccgccggctgcagcggcgtgaacctc
atcgtgcccggccagcagcagtacgagggcggcgtctccatcgtacccgtgtacatggcc
aagggcctcgaattcgactccgtgctccttacggacgtcgacccgctccactacgcggcc
tcgccgcaggacgcgaagctgctctacgtcggctgcacccgggcgctgcatgagctgaag
ctcctctacagcggcgagccttccccgctgatcgcaggagtcgaaggcgactttgtccgg
cacacctga
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