Paenibacillus mucilaginosus K02: B2K_26440
Help
Entry
B2K_26440 CDS
T02041
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2K_26440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmw03019
]
B2K_26440
03016 Transfer RNA biogenesis [BR:
pmw03016
]
B2K_26440
Enzymes [BR:
pmw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B2K_26440
Messenger RNA biogenesis [BR:
pmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B2K_26440
Transfer RNA biogenesis [BR:
pmw03016
]
Prokaryotic type
tRNA degradation factors
B2K_26440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
SPATA25
CsrA
Motif
Other DBs
NCBI-ProteinID:
AFH64186
UniProt:
I0BP89
LinkDB
All DBs
Position
complement(6299038..6301140)
Genome browser
AA seq
700 aa
AA seq
DB search
MQKQVQMDLGGRTLILETGRLAKQANAAVVAKYGDTVILCTVTASSEPKDLDFFPLTVNY
EERLYSVGKIPGGFIKREGRPSEKAILASRLTDRPIRPLFPEGFRNDVQIANIVMSVDQD
CSPEIAAMIGTSAALSISDVPFNGPVGGVIVGRVDGQFVINPTLEQADKSDIHLVVAGTK
DAIMMVEAGADEVPEEVMLEAIMFGHDEIRKIVAVQEQLVAEAGKPKMEVKLHAVDAEVS
AAVREFAQARLIEAIKVQEKHARQEAIDAVNAEAKEHFALVYAETPEKMADVKETLYDIV
KEEVRRLITHDKVRPDGRALDEIRPIECDISLLPRTHGSGLFTRGQTQALSICTLGALGD
VQILDGIDLEESKRFMHHYNFPPFSVGEARPLRPPGRREIGHGALGERALEPIIPNETDF
PYTIRLVSEVLESNGSTSQASICASTLALMDAGVPIKAPVAGVAMGLIKDGEHFSILSDI
QGMEDHLGDMDFKVAGTAKGVTALQMDIKIDGIDRSILTQSLEQAKVGRMHILNKMLERI
QEPKTSLSKYAPKILTMQINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
QEMNEKARQIIEGIVREVIVGEIYLGTVKRIEKFGAFVEILPGKDGLVHISQLSTERVAK
VEDAVKIGDQITVKVTEIDGQGRVNLSRKAVLTAEAPAQT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcaggtgcagatggatctcggcggacgtacgctgatcctcgaaaccgggcgt
ctggccaagcaggccaacgcggccgtcgtggcaaagtacggcgatacggtgattctatgt
acggttacggcttcgtccgaaccgaaagatctcgatttcttcccgctcaccgtgaactac
gaagagcggttatactctgtgggtaaaatcccggggggctttatcaagcgtgaaggccgt
ccgagcgagaaagcgattctggcgagccgtctgacggaccgtccgatccgcccgctgttc
ccggaagggttccgcaacgacgtgcagatcgccaacatcgtcatgagcgtggatcaggac
tgctctcccgagattgcagcgatgatcggaacctcggcggcgctgagcatctccgacgtg
ccgtttaacggccctgtaggcggtgtgatcgtcggccgtgtggatggtcagttcgtcatc
aatccgacgctggagcaggccgataagagcgatattcacctcgtggtagcgggtaccaaa
gacgccatcatgatggtggaagcgggcgccgacgaagtgccggaggaagtgatgctcgag
gcgatcatgttcggccacgatgagatccgcaagatcgttgcggtgcaggagcagctcgtc
gctgaagccggcaagccgaaaatggaagtgaagctgcacgcggtggacgcggaagtcagc
gcagcggtgcgtgaattcgcacaggcccgcctgatcgaagcgatcaaggtgcaggagaag
catgcccgccaggaagcgatcgatgcggtgaatgccgaagcgaaggagcactttgccctc
gtatacgccgaaacgccggagaaaatggccgacgtcaaggaaaccctgtacgatatcgta
aaagaagaagtcagacgcctcatcacgcatgacaaagtacgtccggacggccgtgccctc
gatgagatccgtccgatcgaatgcgacatctccctgctgccccgcacgcacggctccggc
ctgttcacgcgcggtcaaacgcaggcgctcagcatctgcaccctcggtgcgctcggcgac
gtccagattctcgacggcatcgacctcgaagaatcgaagcgcttcatgcaccactataat
ttccctccgttctccgtaggggaagccagaccgcttcgtcctccgggccgccgcgaaatc
ggccacggtgcactgggtgagcgcgcactcgagccgatcattccgaacgaaaccgacttc
ccgtacacgatccgtctcgtatccgaagtgctggagtccaacggttccacctcccaggca
agtatctgcgcgagcacgctggctctgatggatgccggggtaccgatcaaggcgccggtt
gccggtgtagccatgggtctgatcaaggacggcgagcatttctcgattctctccgatatt
caggggatggaagaccacctcggcgacatggacttcaaggtagccggtaccgccaaaggc
gtaacggcactgcagatggacatcaagatcgacgggatcgaccgcagcatcctgacccag
tcgctggagcaggcgaaagtcggccggatgcacatcctgaacaaaatgctggagcgcatt
caggagccgaagacttcgctttcgaagtacgcgccgaagatcctcaccatgcagatcaat
ccggacaagatccgcgatgtcatcggagcgggcggcaaaatcatcaacaagatcatcgaa
gaaaccggcgtcaagatcgacatcgaacaggacggccgcgtcttcatcgcttcttcgaat
caggagatgaacgagaaggcacgccagatcatcgagggcatcgttcgcgaagtgatcgtc
ggcgagatttacctcggtacggtcaagcggattgagaagttcggcgcattcgtcgaaatt
ctgccgggtaaagacggcctcgtgcacatctcgcagctgtcgaccgaacgggtagccaag
gtggaagacgccgtgaagatcggcgaccagatcacggtgaaggtgaccgagattgacggt
caaggccgtgtcaacctgtcccgcaaagccgtactgaccgctgaggcaccggcccaaacg
taa
DBGET
integrated database retrieval system
