Paenibacillus mucilaginosus K02: B2K_27255
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Entry
B2K_27255 CDS
T02041
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw03022
Basal transcription factors
pmw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B2K_27255
09124 Replication and repair
03420 Nucleotide excision repair
B2K_27255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmw03021
]
B2K_27255
03400 DNA repair and recombination proteins [BR:
pmw03400
]
B2K_27255
Enzymes [BR:
pmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B2K_27255
Transcription machinery [BR:
pmw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
B2K_27255
DNA repair and recombination proteins [BR:
pmw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
B2K_27255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFH64347
UniProt:
I0BPQ0
LinkDB
All DBs
Position
complement(6471132..6472823)
Genome browser
AA seq
563 aa
AA seq
DB search
MQFHKDRPLVIQNDFCILLETRHPSFEEVRAGLSRFADLVKSPENIHTYRMSSLSLWNAA
AAGITVEEITDFLERWAKFGIPSAVKTDIRRFVERYGLVRMERTGEDLLLISDDLSVIKE
MVMYKSLRSYGLCQVDARTLRFSPQYRGLLKQELIKLGFPVDDQAGYSRGEELPIRLRDG
GEESPFSLRAYQRAAVDSFYREGGTQGGSGVLVLPCGAGKTVIGIAAMGKLSCATLILTS
NSTSVRQWKREILDKTDVTEDMVGEYTGTQKEVRPITIATYQILTHRKSKDEPFTHMELF
NKRDWGLIVYDEVHLLPAPVFRVTADIQATRRLGLTATLIREDGMEQDVFSLVGPKRYEM
PWKDLESQGWIAAVECVELRVPLPEREMEAYRSASPREQMRMASINPAKLDLVCRLVEQH
KGEQILIIGQYLEQLHDLGSRTGIPVITGSMPSEKREELYDAFRKSAIQELIVSKVANFA
VDLPDAAVAIQVSGSYGSRQEEAQRLGRILRPKAGNNKAYFYTVISEDTREQDFALNRQL
FLIEQGYRYRMEEGTEREEEVAP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcacaaggaccggcctctcgtcatccagaacgatttctgtattctactggaa
acgcgccatccctcgttcgaggaagtgcgtgcgggcctgtcgcgcttcgccgacctcgtc
aaatcgccggagaacatccacacctaccgtatgtcctcgctgtcgctgtggaatgccgcc
gcggcgggtatcacggtggaggagatcaccgattttctcgagaggtgggcgaagttcggc
attccatccgccgtcaagaccgacatccgccgcttcgtggaacgatacgggctggtccgc
atggagcggaccggcgaagacctgctgctgatctcggacgatctctcggtgatcaaggag
atggtgatgtacaaatcgctgcgctcctacggcctgtgccaggtggatgcgcgcaccctg
agattttcgccgcagtaccggggactgctgaagcaggagctgatcaagctgggctttccg
gtggacgatcaggccgggtactcccggggcgaagagctgccgatccgcctgcgggacggg
ggggaggagagccccttctccctgagagcctaccagcgggccgccgtcgattcgttctac
cgggaaggaggcacgcagggagggagcggcgtactcgtactgccctgcggcgctggcaag
accgtcatcgggatcgcggcaatgggcaagctcagctgcgccacgctcatccttacgtcg
aacagcacctccgtccggcagtggaagcgggagattctcgacaagaccgatgtcaccgag
gatatggtgggcgaatacaccggcacccagaaggaagtccggccgatcacgatcgccacg
taccagatcctgacccaccgcaagtccaaggacgagccgtttacccatatggagctcttc
aataaaagagattggggcctcattgtgtacgacgaggtgcacctcctgccggccccggtg
ttccgggtgacggcggacatccaggcgacgcggcgtctcgggctcaccgccacgctgatc
cgggaggacggcatggaacaggacgtcttctcgctggtgggacccaagcgctacgagatg
ccctggaaggacctcgagtcgcaggggtggatcgccgccgtcgagtgcgtcgagctgcgc
gtgccgctgccggagcgggagatggaagcttaccgcagcgcttcgccgagggagcagatg
cgcatggcgagcatcaatccggccaagctggatctcgtctgccggctggtcgagcagcac
aagggcgagcagattctgatcatcggccagtatctcgagcagctccatgatctcggtagc
cggaccggcattcccgtcattaccgggtccatgccgagcgagaagcgggaggagctctat
gacgctttccgcaaaagcgccatccaggagctcatcgtctccaaggtggccaattttgcc
gtggatctgccggatgccgcggttgccattcaggtgtcgggcagctacggctcccgccag
gaggaggcgcagcggctgggccgcattctccgcccgaaggcggggaacaataaagcttac
ttttataccgtgatcagcgaagataccagggagcaggacttcgccctgaaccggcagctg
ttcctgatcgagcagggctaccggtaccggatggaggaaggcacggaacgggaagaggag
gtggctccatga
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