Paenibacillus mucilaginosus K02: B2K_30870
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Entry
B2K_30870 CDS
T02041
Name
(GenBank) porphyrin biosynthesis protein HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw00860
Porphyrin metabolism
pmw01100
Metabolic pathways
pmw01110
Biosynthesis of secondary metabolites
pmw01120
Microbial metabolism in diverse environments
pmw01240
Biosynthesis of cofactors
Module
pmw_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
pmw_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
pmw_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
B2K_30870
Enzymes [BR:
pmw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
B2K_30870
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
B2K_30870
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
DUF7409
DAHP_snth_FXD
Motif
Other DBs
NCBI-ProteinID:
AFH65058
UniProt:
I0BRR1
LinkDB
All DBs
Position
complement(7309182..7310687)
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AA seq
501 aa
AA seq
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MVGAGPGDPKLITLRGLEAIQRADVVVYDRLASPRLLKHMKPGAEKIFVGKLPDKHMLKQ
EEINQLLVDLALQGKTVTRLKGGDPSVFGRVGEEAELLAENEILFEIVPGITSSIAVPAY
AGIPVTHRDFTSSFSIVTGHEYKNKTYNTVNWPNLAQASGTLIFLMGVANLEHICTQLME
GGKSPDTPVALIRWGTWMEQETLTGTLTDIVEKVRAAGFQSPAVTIVGEVVRLREKLAWF
EKKPLFGRRILVTRARSQSSELSAQIDELGGEAVEFPVIRTQPSSKPEAQAARDEAMRSL
GGFDWIFFTSVNGVESFFQRLRELKVDIRSMGGARIAAVGPKTAAALEDRGLVVQTIPSE
FQGAALLEALDGELKPGQQVLLPTADIAREELPEGLRARGLHVTKIDIYETVLETEGGAE
VLELLRQKAIHIVTFTSSSTVTNLIRALQEAGEAQPLELLRGCRIACIGPVTAETAVEVG
LQVDHIAKEATVASLVASLYE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ttggtgggcgccgggcccggggatccgaagctgattacgcttcgggggcttgaggcgatt
cagcgggcggatgtcgtggtgtatgaccgattggcaagccctcggcttctcaagcacatg
aagccgggagccgagaagatcttcgtaggcaagctgccggacaagcatatgctgaagcag
gaagagatcaaccagctgctggtggacctcgcgctgcagggcaagaccgttacccgcctc
aagggcggggaccccagcgtcttcgggcgggtaggggaagaagcggagctcctggccgag
aatgaaatcttgttcgagatcgtgccgggcatcacgtcttcgatcgccgtgccggcctat
gccggtattccggtgacgcacagggactttacgtcttccttctcgattgtgacgggacac
gaatacaagaacaagacctacaatacggtcaactggccgaacctggcccaagcctccggc
acactgatcttcctgatgggtgtagccaacctggagcatatctgtacgcagcttatggag
ggcggcaagtcgccggatacgccggtggccctcatccgctggggaacctggatggagcag
gagaccttgaccggcacgctgacggacatcgtggagaaagtccgggcagccggcttccaa
tccccggccgtcacgattgtcggcgaggtggtccggctgcgcgagaagctggcctggttt
gagaagaagccgctgttcggccgccggatcctcgtgacacgggcacgcagccagagcagc
gagctgtctgcgcagatcgatgagctcggtggtgaggccgtcgagttcccggtgatccgt
acgcagccttcgagcaagccggaagcgcaggcggcacgggatgaagcgatgcgatcgctt
ggcggattcgactggatctttttcacgagcgtcaacggagtggaatcgttcttccagcgg
cttcgcgagctgaaggtcgatatccgatccatgggcggcgcacggatcgcagcggtcggt
ccgaagacggccgccgctttggaagaccgcggactggttgttcagaccattccgtccgaa
ttccagggcgccgcgctgcttgaagcgctggacggcgagctgaagccggggcagcaggtg
ctgctgccgacggcggatatcgcccgggaggaactgccggaaggcctgcgcgccagggga
ctgcacgtgacgaagatcgacatctatgagacggtgctggagaccgaaggcggcgcggaa
gtgctggagctgctgcggcagaaggcgattcatatcgtcacctttacgagctcctcgacc
gtaacgaacctgatccgtgcactgcaggaagcaggcgaagcgcagccgctggagctgctg
cggggctgccggattgcctgcatcggcccggtgaccgccgagacggccgtcgaagtcggg
ctccaggtggaccacatcgccaaggaggctaccgtggcttcgctggtagcttcattatac
gagtag
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