Paenibacillus mucilaginosus K02: B2K_32000
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Entry
B2K_32000 CDS
T02041
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pmw
Paenibacillus mucilaginosus K02
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmw03016
]
B2K_32000
Enzymes [BR:
pmw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B2K_32000
Transfer RNA biogenesis [BR:
pmw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B2K_32000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AFH65275
UniProt:
I0BSC8
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All DBs
Position
7567568..7568146
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AA seq
192 aa
AA seq
DB search
MNSTLRLFAAVPLPDYLKESLGGWISGVKNSVPFRKWVHPQDLHITLQFLGEVEGARTPS
IEKALETAAARSRSFRLQLGHSGTFGRASSPSILWVGLDGSLEELRFLQKQVEGAMTDVG
FQAEERKFKPHVTVARTYQGQAGWDQTELSRHPLPEACLIPWQADRLVLYQSRLGARPMY
EPVSSFSLSSVE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaacgctccggctgttcgcagccgtgccgctgccggactatctcaaagaaagt
ttggggggatggatcagcggggttaagaactcggttccgttccgcaagtgggtgcatccg
caggatctgcatatcacccttcaattcctgggggaggtggaaggcgcaaggacaccatct
attgagaaagcgctggagaccgctgcggcacgctcaagatcgttccggcttcagcttgga
cacagcggaaccttcggacgggcctcgtccccttccatcttatgggtaggtttggacggt
tcactggaggagctgcgcttccttcagaagcaggtggagggcgcaatgacggatgtgggt
tttcaggcagaagaaagaaagttcaagcctcatgtcaccgtggcgagaacgtatcaggga
caagccggctgggaccagacggagctaagccgtcacccgctgccggaagcatgtctgatt
ccgtggcaggccgatcggttggtcttgtaccaaagccgcctgggagcccggccgatgtat
gaacctgtgagcagcttttctttgagttctgtggaataa
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