Paenibacillus mucilaginosus K02: B2K_35705
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Entry
B2K_35705 CDS
T02041
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B2K_35705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmw03021
]
B2K_35705
03400 DNA repair and recombination proteins [BR:
pmw03400
]
B2K_35705
Enzymes [BR:
pmw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B2K_35705
Transcription machinery [BR:
pmw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B2K_35705
DNA repair and recombination proteins [BR:
pmw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B2K_35705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AFH65990
UniProt:
I0BUE3
LinkDB
All DBs
Position
complement(8387175..8390573)
Genome browser
AA seq
1132 aa
AA seq
DB search
MFQDISPIQDFTGNLVLEFIDYSLGEPKYSVDESKERDVTFAAPLRVKVRLINKETGEVK
EQEVFMGDFPLMTETGTFIINGAERVIVSQLVRSPSVYFSTKIDKNGKKTYTATVIPNRG
AWLELETDAKDIIYVRIDRTRKIPVTVLLRALGFGTDAEIIDLLGDDEYIRNTLDKDNTD
STDKALIEIYERLRPGEPPTLDNARSLLVARFFDPKRYDLANVGRYKINKKLHIKNRLFN
QRLAETLADPETGEIIAEAGQLIDRRLLDTILPHLENNVGFKEWSVASGIADMDKIPMQC
VHVYSPIEDGKVVKVISNGKIDKTVKNITPADIISSINYFIDLLHGIGSTDDIDHLGNRR
LRSVGELLQNQFRIGLSRMERVVRERMSIQDVNTITPQQLINIRPVIASIKEFFGSSQLS
QFMDQTNPLAELTHKRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLI
NSLSTFARVNEFGFIEAPYRRVDPNTGVVTAEISYLTADEEDNYVVAQANAELTEDGRFA
KDQVIVRYKDDILTLHKDRVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAV
PLLIPKSPLVGTGMEHKSAKDSGVCIVSKVNGVVERVSANEIWVRRQEMVDGKLVNGDLV
KHKLHKFLRSNQGTCINQRPICHKGEQVRVGDILADGPSTEMGELALGRNVVVAFMTWEG
YNYEDAILLSEKLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALKNLDERG
IIRVGAEIAAGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGTDGIVV
DVKVFTRENGDELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVIARILPEEDMPFLP
DGTPVQVVLNPLGVPSRMNIGQVLEVHLGMAAKYLGIHTATPVFDGAREYDVFDTMEEAG
MQRNGKTLLYDGRTGDPFEREVTVGVMYMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKA
QFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESF
KVLIKELQSLGMDVKILSENEEEIEMKEMDDDDEVTSDKLNLNLEGAEMGVE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggatatttccccgatacaggattttacggggaatttggtgttggaatttatc
gattacagcttaggagagcctaagtactctgtcgatgagtccaaggaacgcgacgtcacc
ttcgctgcaccgcttcgtgtgaaagtgcgtttgatcaataaggagaccggtgaggtaaaa
gagcaggaagtcttcatgggcgatttcccgctgatgacggagacgggtacctttattatc
aacggagctgaacgggttatcgtcagccagctggttcgttcccctagcgtttattttagc
acgaaaatagataagaacggtaagaaaacttacaccgctacggttattccgaatcgtggt
gcctggctggaacttgagactgatgcgaaagacatcatctatgtccggatcgaccgcacg
cggaagattccggttacggtgctgcttcgtgcgctcggcttcggtacggatgcggagatc
attgatctgctaggcgatgacgagtatatccgcaacacgctcgataaggataataccgat
tcgacggacaaggccttgatcgagatctacgagcgcctgcgtccgggcgagccgccaact
ctggataatgctagaagcttgcttgttgcccgcttcttcgatccgaagcgctatgatctg
gcgaatgtcggtcgttacaagattaacaagaaacttcacataaagaatcgtctgttcaat
cagcgtcttgccgaaaccctggcggatccggagaccggtgagatcattgcggaggccggt
cagctcatcgaccgccgcctgctcgatacgatccttcctcatctggagaacaatgtgggc
ttcaaagagtggagcgtagcgagcggcattgccgacatggacaaaattccaatgcagtgc
gttcatgtctactccccgatcgaagacggcaaggtcgttaaggtcatctccaacggcaag
atcgacaagacggtcaagaacatcacgcctgcggatattatctcgtcgatcaactacttc
attgatctgcttcacggcatcggcagcacggatgatatcgaccacttgggtaaccgtcgt
ctgcgttctgtaggtgaacttcttcagaaccagttccgtatcggtctttcccggatggag
cgtgtagttcgggaacggatgtccattcaggacgtcaacacgatcacaccgcagcagctc
atcaacattcgtccggtgattgcgtcgatcaaggagttcttcggcagctcccagttgtcg
cagtttatggaccagacgaacccgctggctgagcttacgcacaagcgtcgtctttcggca
ctcggaccgggcggtctgacgcgtgagcgcgcgggctttgaagtccgtgacgtccaccac
tcccactacggccgcatgtgtccgatcgagactcctgagggaccgaacatcggtctgatc
aactccttgtcgacctttgcccgtgtgaacgagttcggtttcatcgaagctccgtaccgc
cgggtggacccgaatacgggggttgtgactgccgagatctcgtacctgacggcagacgag
gaagataactacgtggttgcacaggcgaacgccgagcttacggaagacggccgttttgcc
aaggatcaggttatcgtccgttacaaggatgatattctgacgctccacaaagaccgtgta
gactacatggacgtatctcctaagcaggtagtatccgtcgctacggcgctcattccgttc
ctcgagaacgatgactccaaccgtgcgcttatgggttcgaacatgcagcgtcaggccgta
ccgcttctcattccgaaatctccgcttgtcggtacagggatggagcataagtcggctaag
gactccggtgtatgtatcgtatccaaggtcaatggtgtggttgaacgtgtatcggccaat
gagatctgggttcgccgtcaggagatggttgacggcaagctggtgaacggagacctcgtt
aaacataagcttcacaagttccttcgttccaaccagggaacgtgcatcaatcagcgtccg
atctgccacaaaggggaacaggttcgcgtaggcgatattctcgctgacggtccttccacc
gagatgggcgagctggcgctgggtcgcaacgtagtcgttgccttcatgacttgggaaggg
tacaactacgaggatgccatcctgctgagtgagaaactcgtgaaagaggacgtctatact
tcgattcacatcgaggaatacgagtccgaagcgcgggatacgaagcttggaccggaagag
attacccgcgacattccgaacgtcggtgaagacgcgctgaagaatctcgatgagcgcggc
atcatccgtgtgggtgccgagattgccgcaggcgacattcttgtcggtaaagtaacgcca
aaaggtgtaacggagctgacggcggaagaacggctgcttcatgcgatcttcggtgagaag
gcacgcgaggttcgtgatacttccctccgtgtacctcacggtacggacgggatcgtagtg
gacgtaaaagtatttacccgcgaaaacggcgatgaactccctcccggcgtaaatcagctg
gtgcgcgtctacatcgctcagaagcgtaagatctccgagggcgataagatggcgggtcgt
cacggtaacaaaggggttatcgcccgtattcttcctgaagaggacatgccgttcctgccg
gatggtacgccggtccaagtcgtgctgaacccgctcggcgttccgtcgcggatgaacatc
ggccaggtgctcgaggttcacttggggatggcggccaagtatctgggtattcatacggcc
acaccggtattcgacggtgcgcgtgagtatgacgtattcgatacgatggaagaagcaggc
atgcagcgtaatggtaagactcttctttatgacggacgtaccggtgatccgtttgagcgt
gaagtgacggttggcgtcatgtacatgatcaagctggcgcacatggtcgacgataagatc
catgcccgttccacaggtccttactcgctcgttactcagcagccgctgggtggtaaagcg
cagttcggcggccagcgtttcggcgagatggaagtatgggcgcttgaggcctatggcgcc
gcttatacgctgcaggagatcctgacggtaaaatccgacgacgtggttggccgtgtcaaa
acgtacgagtcgatcgtcaagggtgagaatgtaccggagccgggcgtaccggagtccttc
aaagtattgatcaaagagcttcaaagcttgggtatggatgttaagatcttgtccgagaac
gaagaggaaatcgaaatgaaggaaatggacgacgacgatgaggtcacaagcgacaaattg
aacctcaatctggaaggcgccgagatgggtgtggagtaa
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