Paenibacillus mucilaginosus K02: B2K_37535
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Entry
B2K_37535 CDS
T02041
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pmw
Paenibacillus mucilaginosus K02
Pathway
pmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2K_37535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmw03019
]
B2K_37535
Enzymes [BR:
pmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B2K_37535
Messenger RNA biogenesis [BR:
pmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B2K_37535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
rpo132
Motif
Other DBs
NCBI-ProteinID:
AFH66338
UniProt:
I0BVE1
LinkDB
All DBs
Position
complement(8777840..8779108)
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AA seq
422 aa
AA seq
DB search
MTFQQLQLIPPIIKALAKENYTQPTPIQEQAIPPVLAGRDLFGCAQTGTGKTAAFLLPII
QLLSTQQGRPNGKRVIRSLILTPTRELAIQISDNAKAYGCFTNLRYGVIVGGVSQRPQEQ
LLEQGMDILIATPGRLIDLMNQGFVDLSHVQILVLDEADRMLDMGFIHDMKRIIAKLPVK
RQTLFFSATMPPEITSLVNSLLKNPVKIEITPVSSTAERIKQMLYYVDKPNKLLLLIDLL
QDKSIASALVFTRTKHGADRVVRGLTKAKITAQAIHGDKSQNARQAALNNFKSGATRLLV
ATDIAARGIDIEELSHVINYNLPNIPETYVHRIGRTGRAGLSGIAISFCENEEIPYLKDI
EKLTKQKIPVVTDHPYPMTMTEPVPATVGADRANGAPSKDGARGHSGKSGGGRRRRRPHA
GK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgacattccaacaattacagttgattccccctattattaaagcgctggccaaggaaaat
tatacgcagcctacgcctattcaggagcaggcaatcccgccggtgctggcgggccgtgac
ttgttcggctgcgcccagacggggaccggcaagacagcagcattcctgctgccgatcatt
cagctgctgagcacacagcaggggcgcccgaacggcaagcgcgtcattcgttcgctgatc
ctgacgcctacgcgtgagttggctattcagatttccgacaacgccaaagcttacggatgc
ttcacgaatctgcgctatggtgtgatcgtgggcggcgtctcgcagaggcctcaggagcag
ctgctggagcagggcatggacattctgattgcgacaccgggtcggctgatcgacctgatg
aatcaagggttcgtcgacctgagtcacgtgcagattctggtgttggacgaagccgatcgg
atgctcgacatggggttcattcatgatatgaagcggatcattgccaagctgccggtcaag
cggcagacgttattcttctctgcgacgatgccgcccgagatcacgtccctggtaaactct
ttgctgaagaatccggtgaaaatagagattacccctgtttcctcaacggcggagagaatt
aagcagatgctctactatgtggacaagccgaataaactgctgctgctgattgatctgctg
caggacaagtcgatcgcaagtgcgctcgtgttcacccgtacgaagcacggcgcggaccgg
gtggtgcgcggcttgacgaaggcgaagattacggcgcaggccattcatggcgacaagtcg
cagaatgcccgccaagcagcgctgaataacttcaagagcggtgcgacccgcttgctggtg
gcgacggacatcgcggcacggggcatcgacattgaagaactgtcgcacgtgattaactat
aatttgccgaatattccggagacgtatgtccatcggatcggccgtaccggacgtgcgggc
ttaagcgggattgcgatttcgttctgcgagaacgaggagattccctatctgaaggatatc
gagaagctgacgaagcagaaaatcccagtagttacagatcatccttacccgatgacgatg
acggagccggtaccggcgacggtgggggcggacagagccaatggtgcaccatccaaggac
ggtgctcgcggacacagcggcaaatccggcggcggccgccgcagacggcgaccccatgct
ggaaagtaa
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