Persephonella marina: PERMA_0054
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Entry
PERMA_0054 CDS
T00870
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pmx
Persephonella marina
Pathway
pmx00550
Peptidoglycan biosynthesis
pmx01100
Metabolic pathways
pmx01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PERMA_0054 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PERMA_0054 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmx01011
]
PERMA_0054 (mrdA)
Enzymes [BR:
pmx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PERMA_0054 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmx01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PERMA_0054 (mrdA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ACO03399
UniProt:
C0QT37
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All DBs
Position
complement(51940..53733)
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AA seq
597 aa
AA seq
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MRIDRFNLLVIAFLLVFLILAGRLVYLQILKGTYYRELSEKNHLRLITLNPPRGKIYDRN
GILLAYDEPSYNLYVFPYIVKKNLPELKKNLKKILGIDLDEKTEERIKKGFARKVIIKKD
LSEKSIKIFFNYSYLFNGLFIEVQPKRVYTEYAKYMPHLLGYVGYPSEKDLREDPSLSPD
MLIGKQGVEKIYDRYLRGKYGVKAVVVDALGRLKKVLWEIQPKRGNDIYLTIDARIQKIA
YEAFKNSGQKSGAVIIVNPQNYEILALLSYPLYNIQKFSDGLTKKEWNKLIKNKYKPLFN
KALSGIYPPGSIFKIIVGLAALQEGVVSPYQKIYSGGSFEIGNWVYRNWDPSGCGSIDVR
QALEMSCDTYFYQIGLDLGATKISYYASLFGLGEKLNPEIEKRRSRVPVPEWKMSAIGEP
WFLGDTVNYSIGQGFLAITPFDGIKIISPIANGGKVYKPKLLKSYFDMDLQELVETKPEL
IRVLDIKKDYIKVIKKGLYLVVYGKKGTARKLSDLPVKNAGKTGTAQVFRKPEKNKKIDR
WDLQNHAWYVAFFPYKKPRFALSVFVEHGIGGSKTAVPITKSIIMKLYKEGLINEKH
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagacagatttaatcttttagtgatagctttcttactggtattcctgatctta
gcagggagacttgtgtacctgcagatccttaagggtacatactacagggagctttctgaa
aagaaccatctcagacttataacattaaatcccccacgaggaaagatatacgacaggaac
ggtattctacttgcttatgatgagccttcctacaacctgtatgtctttccatacatagta
aaaaagaatcttcctgaactgaaaaagaatctgaagaagatactcgggatagatttagac
gaaaagaccgaagagagaataaaaaaaggctttgccagaaaggttataataaaaaaagat
ctatctgaaaaaagtataaagattttctttaactactcatacctatttaatggtcttttt
attgaggttcagcctaaaagggtttacacagagtacgcaaagtatatgccccacctactc
ggttatgtaggttatccatctgagaaggatctgagggaagatccatcactatcacctgat
atgcttataggaaaacagggtgttgagaagatctacgacaggtatctgagaggtaagtac
ggtgtaaaagctgttgttgttgatgcacttggaagactgaaaaaggttctgtgggagata
caaccaaaaaggggtaacgatatatatcttacaattgatgcaagaatacagaagatagcc
tatgaggcctttaaaaactcaggacagaaatctggagctgtgattattgtaaatccacag
aactatgagattcttgcccttctaagttatcccctttacaacatacagaagttctcagac
ggcctgactaaaaaagagtggaataagctaattaaaaacaagtataaaccattattcaat
aaagctttaagcggtatataccctccaggatcaatatttaagataattgtaggccttgca
gcccttcaggaaggggttgtgtcaccataccagaaaatatacagcggtggatcctttgag
ataggaaactgggtttacagaaactgggatccttcagggtgtggcagtattgatgtcaga
caggctcttgagatgtcgtgtgatacatatttttaccagataggtcttgatcttggggct
acaaagatatcctactatgcctcactttttggactcggtgagaagctaaatcctgagatt
gaaaagagaagatcaagggttcccgttcctgaatggaagatgtctgcaataggagagccc
tggtttcttggggatactgtaaactacagtataggacagggatttctcgctatcacaccc
tttgacggtataaagatcatatcacctatagccaacggcgggaaggtctataagccaaaa
cttcttaaaagttattttgatatggatcttcaggaacttgttgaaacaaagcctgaactt
atcagggttcttgatataaagaaggattatatcaaagtcataaaaaagggtttgtatctc
gttgtttatgggaagaaagggacggcaagaaaactgtcagatctccctgtaaaaaatgca
ggaaaaacgggaacagcacaggttttcagaaagcctgaaaaaaacaaaaagatagacaga
tgggatttacagaaccacgcatggtatgttgcgttttttccatacaaaaaaccaagattt
gccctctctgtttttgtggaacatggtataggaggtagtaaaacagcggttcccataaca
aaatccattataatgaaactttataaagaaggacttataaatgaaaaacattaa
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