Persephonella marina: PERMA_0197
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Entry
PERMA_0197 CDS
T00870
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmx03016
]
PERMA_0197 (trmE)
Transfer RNA biogenesis [BR:
pmx03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PERMA_0197 (trmE)
Prokaryotic type
Methyltransferases
PERMA_0197 (trmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
MMR_HSR1_Xtn
Ras
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Roc
Gtr1_RagA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACO04076
UniProt:
C0QTI0
LinkDB
All DBs
Position
177252..178610
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AA seq
452 aa
AA seq
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MIKDTIVANATPLIPSAVSIIRISGDRALEIGRKLFRLPESIRERRVYFGKITDSKGSVI
DEGLFIFFKGPRSFTGEDVVEIYPHGSVPVVKKIIEEAVNLGARFAQPGEFTKRAFINGK
IDLTQAEAIADLIEARSEKASRVAVNILEGKLSEKVKELRNSLLYLVSLIEAEINFPEDV
EEIDPDQIKKGLEHVIKGIDDLLRTYRKGEIIREGIKLAIVGRPNVGKSSLFNALVGYER
AIVSEYRGTTRDFIEETVSIKGIPVKLLDTAGLRETEDKIELIGIKKAKEKIEEADVVIF
VFDLSEGLTDEDLRIYEQIKYKDPIVVGNKSDLVNEKELDIFRKKYYFKNVLFVSTKLQK
NLDHLEEEIFHKLGIIEDSDSEIYINLRHYKALEKAKNILKKTVQNIDELIDFKEILMLE
ISEAEKYLEEITGEITTEDVLENIFSRFCIGK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagatacaatcgtagcaaatgcaacaccgcttatcccttcagctgtttcgatt
ataaggataagcggtgatagggctttagaaatagggagaaaactgttcaggctccctgag
tctatcagggagagaagagtatattttggaaagataacagacagtaaaggaagtgttata
gatgaggggctctttattttctttaaaggtccaagaagctttacaggtgaggatgttgtt
gagatataccctcatgggagtgttccagttgtaaagaaaattattgaagaagctgtaaat
cttggagcgagatttgcacaaccaggtgagttcacaaagagagcatttataaacggaaag
atagatcttacacaggctgaggctatagccgatctgatagaggcaagatctgaaaaagct
tcccgtgtagctgtaaacatacttgaaggtaagctctctgaaaaggtaaaagaacttaga
aacagtcttttgtatcttgtatcacttattgaggctgagattaacttcccggaagatgtt
gaggagatagatccagatcagataaaaaaaggactggaacatgttattaaagggatagat
gatcttctaagaacgtacaggaaaggagagatcataagggaaggtataaagcttgctata
gttggaagaccaaatgttggaaaatcatctctctttaatgctctcgtaggatatgaaagg
gctatagtttccgagtatagaggaacaacaagggattttattgaggagactgtatcaatt
aaaggaatacctgttaaactccttgatacagctggattaagggaaactgaagacaaaata
gagctgataggtattaaaaaagcaaaagagaagatagaggaagctgatgttgttatattt
gtttttgatctttctgaaggcttgactgatgaggatctgagaatctacgaacagataaag
tataaagatcctatagttgtaggtaacaaatccgatcttgtaaatgaaaaagagcttgat
atttttagaaaaaagtattattttaagaatgtactatttgtcagtactaaacttcagaaa
aacttagatcatttagaagaagagatcttccacaaacttggaataattgaggatagcgat
tcagaaatatatataaatcttagacattacaaagcattagaaaaagcaaaaaatattctt
aagaaaacagttcagaatattgatgaactgattgattttaaagagattctaatgcttgag
ataagtgaggcagaaaaatatctcgaggaaatcacaggtgagataaccacagaggatgtt
cttgaaaatatattcagtagattttgtataggaaaataa
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