Persephonella marina: PERMA_0250
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Entry
PERMA_0250 CDS
T00870
Name
(GenBank) T/G-specific DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pmx
Persephonella marina
Pathway
pmx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PERMA_0250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmx03400
]
PERMA_0250
Enzymes [BR:
pmx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PERMA_0250
DNA repair and recombination proteins [BR:
pmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PERMA_0250
Prokaryotic type
PERMA_0250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
CdiI
EndIII_4Fe-2S
RhoGEF
Motif
Other DBs
NCBI-ProteinID:
ACO04343
UniProt:
C0QTN1
LinkDB
All DBs
Position
complement(225213..225899)
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AA seq
228 aa
AA seq
DB search
MKKTSVNCKALLDDFDVKHFHEKLFSWWEDHKRIYPWRFEKDPYKVLIAEIFLHRTNSSQ
VEKVYKDFIDKFPDIRSLLKAKKEEISPLLQSLGLKWRQELFNKMILILREKYGGNIPLN
HKELKSLPGIGDYIAAAVIIFTLNNPLPLLDSNIVRVTGRLFCLKITDSSRRSRLFRNYI
YCLIYKNDPRVFYYALIDFAALVCKPKDPDCDKCPLRNFCCIYKNQGR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaagtgtaaattgtaaagctttgttagatgactttgatgttaaacatttt
catgaaaaactattttcatggtgggaagatcataaaagaatttatccctggagatttgaa
aaggatccatacaaagtattaatagctgagattttcttgcacagaactaattcttcacag
gttgaaaaagtctataaagattttattgataaatttccagatataagaagccttctaaaa
gcgaaaaaagaagagatttcacccttactgcaatcacttggactaaaatggaggcaggaa
ttattcaataagatgattttaatactgagagaaaaatatggaggtaatattccactcaat
cataaagaattaaaatccttaccaggaataggagactatatagcagcagcagttattatt
tttacactgaacaatccattacctcttcttgactcaaatattgttcgcgtgaccggaaga
ttgttctgtctgaaaataactgattcttcaaggagaagcagattgtttcgtaattatatt
tactgcttgatatataagaacgacccaagagttttttactatgctcttattgatttcgcg
gcacttgtatgtaaacccaaagatccagactgcgataagtgcccattaaggaatttttgt
tgtatttataaaaatcaggggaggtag
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