Persephonella marina: PERMA_0311
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Entry
PERMA_0311 CDS
T00870
Name
(GenBank) transcriptional regulator, AsnC/Lrp family
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
pmx
Persephonella marina
Pathway
pmx00860
Porphyrin metabolism
pmx01100
Metabolic pathways
pmx01110
Biosynthesis of secondary metabolites
pmx01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PERMA_0311
Enzymes [BR:
pmx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
PERMA_0311
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_AsnC-type
HTH_Crp_2
DUF3970
HTH_36
DUF2004
DUF2805
Motif
Other DBs
NCBI-ProteinID:
ACO04284
UniProt:
C0QTT9
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All DBs
Position
288016..289050
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AA seq
344 aa
AA seq
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MTEFEKELLTILQEGIPIVENPFNAIAKKIGTSEDDVIESIKKLKKEKIIRQISPIYDTK
ALGYSSSLVAFKVKDIQKAVSVINSHPGVSHNYERNDQYNIWFTLAVPPDSKIGLDETVE
ILADLSGAEDYVILRTVKTYKIGVKLTFSSLDERSEDMNQSYNAGNVNLYEIEKNIIKIT
QEDIPLEPKPFHIFADKLGIPVYTLLHKLNQFKENRVMRRFAAILYHRKAGFKANGMTVW
KVPEEIADDVGKFFSTFKSVSHCYLRTINGRWSYNLFSMIHGRTKEEIEEFVEKLSRETG
ISDYKILYSTKEFKKKRIRYFSEDFKLWEEAIINGERTGANIQG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtttgagaaggagcttcttacaatacttcaggaaggtatacctatagtagag
aaccctttcaatgctatagcaaaaaagatcggtacttctgaagatgatgtgatagagagt
ataaaaaagttaaaaaaggaaaagataataagacagatatctcctatatacgacacaaaa
gctctgggatacagcagctctcttgttgcttttaaggtaaaagatatacagaaagctgtc
tctgttataaactcccatcctggagtgagtcataactacgaaagaaatgatcagtataat
atctggttcacacttgctgttccacctgacagtaagataggtcttgatgagaccgttgag
atactggctgatctttctggtgctgaggattatgtgatattgagaactgttaaaacatac
aaaataggtgtaaagcttacattcagcagtcttgatgaaaggtctgaagatatgaaccag
agttacaatgctggtaatgttaatctctatgagatagaaaagaatattataaagatcact
caggaggatatccctttagaaccaaaacctttccatatatttgctgataaactgggcata
cccgtttatacattactccataagcttaaccagtttaaagagaacagagtgatgagaaga
tttgctgcaatactttaccacagaaaggcaggttttaaggcaaatggtatgacagtctgg
aaagtgccagaggagatcgctgatgatgtaggtaaattcttttcaacatttaaatctgta
tcccactgctatcttagaactatcaatggacgctggagttataaccttttcagtatgata
cacggaagaactaaagaggagattgaagagtttgttgaaaagttgagcagagaaacaggg
atcagtgattacaaaattctttactcaacaaaagagttcaaaaagaagaggatcagatac
ttttctgaagattttaaactctgggaggaggctattataaatggagaacgtactggagca
aatatccaaggttaa
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