Persephonella marina: PERMA_0446
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Entry
PERMA_0446 CDS
T00870
Name
(GenBank) ABC transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pmx
Persephonella marina
Pathway
pmx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PERMA_0446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmx02000
]
PERMA_0446
Enzymes [BR:
pmx01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PERMA_0446
Transporters [BR:
pmx02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PERMA_0446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
ABC_membrane_2
GT87
DUF2288
nSTAND3
Zeta_toxin
MeaB
AAA_29
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACO04204
UniProt:
C0QU71
LinkDB
All DBs
Position
400604..402319
Genome browser
AA seq
571 aa
AA seq
DB search
MKKDISFLLSLFKKYWVLLFLAIAGSLLESGALAGLAYIVKNIVDDVFVSKSYESLVFVT
AVLIILASAKQIGFFLKNYVYPLIVYKGIKNIRENIYGKLLNTQPSFLFKHSYGDILSRL
TNDLERFSQIVTSFGTNVITETFTVMAIIVLLIYRDWKMFLIFLVAVPFLTVALGFFGEK
RKKYSKKLQESYGDYTQHLNQLLTGFEVVKLFSQKVFFKIFRIINENLYHREKKNKFYET
VYLSSVEIIAYTATAGIIFYGGYRIINEEITAGDFFSFLGGVLILVNSMQVLQRGLVQLK
ALSPVIERIKFLLDMPEEKDEGIEFEGLKDRIVYKNVSLKIDNNQILKDVNLKINKGEKL
GIVGLTGSGKSTVVKILPGLIKDYEGNVFIDDHELREYSVSSLRKHIGVISQDVFIFNDT
LRNNLLIAKPDATDEELYQALKKAKADFVFSMENGLDTVLGEKGSRLSGGERQRISIARI
FLKDPDILIIDEGTSALDVETEEYVMEEIKEHFSDRTVIMITHRLKILDICDRIAVMDKG
TVVEEGTKKELLEKKGIFYRFFSLSQTDDKI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagacattagttttttactttcactttttaaaaagtactgggttctgcttttc
ctggcaatcgctggaagtctccttgagtcaggagctttagccggacttgcatatatagtt
aagaatattgttgatgatgtttttgtatcaaaaagctatgaaagtctcgtttttgttaca
gctgttcttattatacttgcgtcagcaaaacagataggatttttcctcaaaaactatgtt
taccctctgatagtttacaaagggattaaaaatataagggaaaatatatacggtaaactt
cttaatacacagccttcatttctatttaaacactcatacggtgatatactgagcagactc
acaaatgatcttgagagattttcccagattgttacatcatttggaacaaatgtgataact
gaaacatttacggttatggccataatcgttcttcttatatacagagactggaagatgttt
ttaatattccttgtagctgttccttttctcacagttgctctcggattctttggagagaaa
agaaagaaatactcaaaaaaacttcaggagagttacggggattacactcagcatctaaac
cagcttttaacgggttttgaggttgttaagcttttcagccagaaggtatttttcaagata
ttcaggattataaatgaaaatctttaccacagggagaagaaaaacaagttttatgagact
gtatatctttcttcggttgagataatagcctacacagcaacagcaggaataatattttac
ggcggatacagaataataaatgaagagataacagcaggggattttttctcatttttaggt
ggtgttctgatacttgtaaactcaatgcaggttcttcaaaggggtcttgttcagcttaaa
gccctatctcccgttattgaaagaataaaattccttttagatatgcctgaggaaaaagat
gaaggaatagagtttgagggtttgaaggacaggatcgtttataaaaatgtatcccttaag
attgataacaaccagatacttaaagatgtaaaccttaagataaataaaggagaaaaactt
ggtattgtcggacttacaggatctggaaaatcaaccgttgtaaagatacttccaggatta
ataaaagattatgagggaaatgtttttattgatgatcatgagctcagagagtattcagtc
tcctctttgagaaaacatataggcgtgatatctcaggatgtttttatctttaatgatact
ttgagaaacaatctgcttatagcaaaaccagatgcaacagatgaggagttatatcaggcc
ttaaaaaaggcaaaggcggattttgttttcagtatggagaatggccttgatactgttctt
ggtgagaaaggatcaagactctcgggaggggagagacagagaatatctatagcgaggata
ttccttaaagatccggacatacttattattgatgagggaacatctgcccttgatgttgag
actgaagagtatgtgatggaggagattaaggaacatttctcagacagaacagtaataatg
ataacccacagacttaagatacttgatatatgcgataggatagccgttatggataaaggg
actgttgttgaggaagggacaaaaaaagagcttcttgagaaaaaaggtatcttttacaga
tttttctcactatcacaaactgatgataaaatataa
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