Persephonella marina: PERMA_0475
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Entry
PERMA_0475 CDS
T00870
Name
(GenBank) ATP-dependent rna helicase, dead/deah box family
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
PERMA_0475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
Cas3-like_C_2
WHD_HRQ1
Motif
Other DBs
NCBI-ProteinID:
ACO02998
UniProt:
C0QU99
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Position
424549..426999
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AA seq
816 aa
AA seq
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METLRYYRNRIAYSRIIPPVFPEYGQFDFKNEKLKSFLERKDIKLYSHQVEGLNAVKEGK
NIVVTTPTASGKSFIYILSILERLKENPETKGIIIFPLKALARDQYGKIMDLILETGIDA
RVDVYDGDTDREKRQEIKKDPPTFLITTPDMLNAGILPYHTGWSSFFENLDFIVLDEIHA
YRGILGSHIANIVRRLKRITGYYRTKKPVFIMNSATVHNPSSFASKLIGEEVVEISRSGA
PSPEREIQIFRNLRSSETAELIANTVIEDISSIVFVDSRKEAEILSLRVKDILVKKGRDD
LVDKVSPYRSGYTPAERREIEFKLLTKNILAVISTSALEMGIDIGDLDNCILVGYPGTLA
QLWQRFGRAGRRDRKAYNILIPKRNALDQYFVKNPEELFYRKMEEPVINPENRYILKKHL
PVMASEIPIKLDELSENEKEVARELYKEGIIRFSNNKLYASRQKPFSIRSAGESFRIVET
VSGRVIGDISEDIVLYEAHPGAVYLHNGEKYIVEHLDMEGKVVYVVHSNISYITEPLKES
FIEIIKVEDFRKAGSIEIFRGKVKVKTTVVGYSMRDIEFDEKMNEELFDPDKYLSREFET
VAFWWTMPQEWEEEIIHRNLKHNARMLYSFIIQKGKLYTGKFVYSDLVFENLLKFRKSGD
ITAFEFALKATESFVSRLSQKEKEQFNEYKRRIKERKNGFLGGLHGVEHGLIGIYPLFAM
NDRWDIGGLSTPFFPETGRPTVFIYDGYEGGVGYSEVGFNRLKEMMESTYKTISKCGCIS
GCPSCIYSPKCGNSNDYLDKTASIILSHRILKELSK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttaagatactacaggaacagaatagcttactcaaggataatcccacctgtt
tttcctgaatacggtcagtttgattttaagaacgagaagctaaaaagttttttagagaga
aaagatataaagctctactcacatcaggtagaaggacttaacgccgtaaaagaagggaaa
aatattgttgtaacaacacctacagcatcaggtaaatcttttatatacatactttcaata
cttgaaaggctgaaagagaatcctgagacaaagggaattataatctttcccctcaaagct
ttagcccgggatcagtatggaaagataatggatcttatacttgagaccggtatagatgca
agagttgatgtttatgatggggatacagacagagaaaaaagacaggagataaaaaaagat
ccaccaacatttcttataacaacacctgatatgctgaatgcagggatacttccttatcat
acaggctggtcttcattttttgagaatcttgattttatagtacttgatgagattcatgct
tatagaggaatacttggatcccatatagcaaatatagtgagaaggctgaagagaataaca
ggatactacagaacaaaaaagcctgtttttataatgaattctgcaacagttcacaatcca
tcttcttttgcatctaagcttattggagaggaggttgttgagatatcaagatcaggtgca
ccatcacctgagagggagatacagatcttcaggaatttaagatcctctgagacagcagag
cttatagcaaatacagttattgaggatatatcaagtatcgtttttgttgacagtagaaag
gaggccgagatactgtcactcagggttaaggatattcttgtaaagaaagggagagatgat
ctggtagataaggtaagtccttacagatctggttacacacctgcagaaagaagagagata
gagtttaaacttcttacaaaaaatatacttgctgtgatctcaacaagtgcccttgagatg
ggtattgatattggagaccttgataactgtattcttgttggatatcctggaaccctagca
cagctctggcaaagatttggaagagctggaagaagggataggaaggcatacaacattcta
ataccaaaaaggaatgcgttagaccagtactttgttaaaaatcccgaggagcttttttac
agaaagatggaagaacctgttataaatccggaaaacagatacatacttaaaaagcacctt
cctgtgatggcaagtgagatacctataaagcttgatgaactttctgaaaatgagaaagag
gttgcaagggagctgtataaggaaggcattatcagattttcaaataacaagctttacgct
tcaagacagaagcctttcagcattagatcagcgggagagagtttcaggattgttgagaca
gtttcaggaagagttataggagatatatctgaggatatcgtcctttacgaggcacatcct
ggagctgtttatttacataacggagagaagtatatagttgagcatcttgatatggaaggt
aaggttgtttatgtggttcattctaatatctcctatataacagagcctttgaaagagtct
ttcatagagataataaaggttgaggatttcaggaaagcgggaagtatagagattttcaga
gggaaggtaaaggtaaaaacgactgttgtaggatactcaatgagggacattgagtttgac
gagaagatgaacgaggagttgtttgatcctgataagtatctatcaagggagtttgagact
gttgctttctggtggacaatgcctcaggaatgggaagaggagatcatacacagaaattta
aaacataacgcaagaatgctttacagctttatcatccagaagggaaaactttacacaggg
aagtttgtatactctgatcttgtttttgagaatctactgaagttcagaaaaagtggggat
attacagcttttgagtttgcattaaaggcaacagagagttttgtaagcagactcagccag
aaggagaaagagcagtttaatgagtataaaagaaggataaaagagagaaaaaacggattt
ttaggtgggttacacggtgttgaacacggtcttataggtatttatccactttttgctatg
aacgacagatgggatataggaggtttatcaacacctttcttccctgaaacaggaagacct
acagtttttatttacgacggttatgagggtggtgttgggtattcagaggttgggtttaac
agacttaaggagatgatggaaagtacatataaaacgatctcaaaatgtggctgtatatca
ggctgtccatcctgtatttactcgccaaaatgtggaaactcaaatgattatcttgataaa
acagcttctataattctttcccacagaatactgaaagagctttctaaatga
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