Persephonella marina: PERMA_0494
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Entry
PERMA_0494 CDS
T00870
Name
(GenBank) conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmx03009
]
PERMA_0494
Enzymes [BR:
pmx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PERMA_0494
Ribosome biogenesis [BR:
pmx03009
]
Prokaryotic type
ribosomal protein modification factors
PERMA_0494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ACO04432
UniProt:
C0QUB9
LinkDB
All DBs
Position
447526..448824
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AA seq
432 aa
AA seq
DB search
MKIGVISLGCPKNLVDTELILGRLKTDKVQIVSDLNDAEVILVNTCGFIDEAKEESVNTI
LEVARLKENGNKKIVVTGCLVERYKKELEKEIPEVDMFIDLKEELLIPEKLGIKVDNFSS
PYQKRLLTTPKHTAYLKISEGCDHTCGFCAIPSIRGKHRSRTIEDIVEEAKRLADLGVKE
LNIVSQDTSYYGTDIYGKPMLWELISRLEKIEGVRWIRLYYLYPTTVTEDFIKRMADSEK
VVKYFEMPIQHTEDRILKDMMRGYRKSRIEKILEWKDRYIPEAAVRSAVIVGFPTETERD
FESMKDFIKQAKFDWLGVFKYSHEEGTPAYTKYRDSIPEEEKIRRKNEITQLQEGITEEK
NRDLIGKEIEVIVDGFSEEWETLPVGRTYRSAFEIDGIVYIETERPVKVGDFAKLKIKDL
ADSYDLVGEICE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaagattggtgtaataagtttaggctgtccaaaaaatcttgttgatactgagcttata
ctcggtaggctaaaaacagataaggttcagatagtgagcgatctgaatgatgctgaggtt
atactggtaaacacctgtggttttatagatgaagcgaaggaggagtctgtaaatactata
cttgaggtggcacgtctgaaagagaatggaaacaaaaagattgtagttacaggatgtctt
gttgagagatataaaaaagagcttgaaaaagagatacctgaagttgatatgtttatagat
ctgaaggaagagcttttgatccctgagaagctgggaataaaagtagataacttctcctca
ccgtaccagaaaagattactgacaacaccgaaacatacagcctaccttaagatatctgag
ggatgcgaccacacctgtggattctgtgctatcccatcaataaggggaaaacacagaagc
agaactattgaggatattgttgaagaggcaaaaaggctggcagatctgggagtaaaagag
ctgaatattgtctcacaggatacaagctattacgggactgatatctatggaaaacctatg
ctctgggagctaataagcaggttagaaaagatagaaggtgtaagatggataagactttac
tacctttatcctactacggtgacagaggattttataaaaaggatggctgacagtgagaag
gttgttaagtattttgagatgcctattcaacatacagaggacaggattctgaaagatatg
atgaggggatacagaaaaagcagaattgagaaaatacttgaatggaaggataggtatatt
cctgaagctgctgtcaggtctgctgtgattgtaggttttcctacagagacagagagagat
tttgagagtatgaaagattttataaaacaggctaaatttgactggcttggtgtttttaag
tactcacatgaggaaggaacacctgcatatacaaaatatagggactctatcccagaggaa
gagaagataagaagaaaaaatgagataacacagctgcaggaaggtataacagaagagaaa
aatagagatcttattggaaaggagatagaggtaattgtagatggtttttctgaggagtgg
gaaacactccctgtaggcagaacatacaggagtgcttttgagatagacggtatcgtttat
atagaaacggaaagacctgttaaggttggtgattttgcaaaactgaaaataaaggatctt
gcagacagttatgatcttgttggagagatatgtgaatag
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