Persephonella marina: PERMA_0590
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Entry
PERMA_0590 CDS
T00870
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmx
Persephonella marina
Pathway
pmx03030
DNA replication
pmx03430
Mismatch repair
pmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PERMA_0590
03430 Mismatch repair
PERMA_0590
03440 Homologous recombination
PERMA_0590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmx03032
]
PERMA_0590
03400 DNA repair and recombination proteins [BR:
pmx03400
]
PERMA_0590
Enzymes [BR:
pmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PERMA_0590
DNA replication proteins [BR:
pmx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PERMA_0590
DNA repair and recombination proteins [BR:
pmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PERMA_0590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACO03210
UniProt:
C0QUL4
LinkDB
All DBs
Position
complement(543948..544565)
Genome browser
AA seq
205 aa
AA seq
DB search
MYNLTTDEAVFTIIDIETTGFNPESNDIIEIAAIKYQGNIILDRFWSLIKPEIELIPEHI
SKLTGITTAMVIDQPTVDKVLPDFLNFIENTILVGHNIRFDLAFLNKKAKEILNKTIKNP
FICTDHLARKILSDIDSKSLASIAQHFNIPFSRQHRAMYDAEVNLEIFIKMLRFLEDYNV
FKVMDIIKLSEGKKVNYREKRRRYV
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgtataatctaacaactgatgaggctgttttcaccataattgatatcgagacaacaggt
tttaacccagagagcaacgatataatagagatcgcagcaataaaatatcagggaaatata
atcctggatagattctggagtcttataaaacctgagattgagcttatacctgaacatata
tcaaagcttacagggataacaacagctatggttattgatcagcctacagttgataaggtt
ctgcctgattttttaaactttatagaaaatacaatactagtcggtcacaatataaggttt
gatcttgcatttttaaacaaaaaggcaaaggagatactgaataagacgataaaaaaccca
tttatatgcacagaccatctcgcaagaaagatactctcagacatagacagtaaatccctt
gcaagtatagcccagcatttcaatatacctttctcaagacagcacagggcgatgtatgat
gctgaggtaaaccttgagatttttataaagatgctccgcttccttgaggattacaatgtt
tttaaggttatggatataataaaactgtctgaagggaaaaaagttaactacagggaaaaa
aggagaaggtatgtttag
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