Persephonella marina: PERMA_0631
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Entry
PERMA_0631 CDS
T00870
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmx03016
]
PERMA_0631 (truB)
Enzymes [BR:
pmx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PERMA_0631 (truB)
Transfer RNA biogenesis [BR:
pmx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PERMA_0631 (truB)
Prokaryotic type
PERMA_0631 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Pus10_C
CABIT
Glyco_hydro_7
Motif
Other DBs
NCBI-ProteinID:
ACO03605
UniProt:
C0QUQ5
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All DBs
Position
complement(587544..588425)
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AA seq
293 aa
AA seq
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MDGILLVDKPENITSNHLVQKIKKHFKQITGKEIKVGHTGTLDYFASGLMVITVGKATRL
TEYFQGLDKEYIATGELGKITDTYDRQGRVIEEKECKIDEDQLKDIILSFKKRYLQTPPP
YSSKRIEGKRAYQLAKKGIQVKLKPKEVTIYSIQILKIEMPFFTIKVHCSSGTYIRSLVK
EIGDKAGCGAYVKSLRRTKVGIFSVENAIKLEELLRMTEQDIESRLIDIKDALYFFTEIL
LDPVFDERFIKGQRFKVPYSIKGLVKVLDKNKRFLGIGEIKENQILQPVKVFI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggacgggatacttctggttgataaacctgaaaatataacatcaaatcatcttgttcag
aagataaaaaagcattttaaacagataaccggaaaagagataaaggttggtcataccggg
acgcttgattatttcgcatcaggtcttatggtcataacagttgggaaagcaacaagactt
acagagtactttcagggacttgataaggagtacatagcaacaggagagctcgggaagata
acagatacatacgacaggcagggtagagtgatagaagagaaggagtgtaaaatagacgaa
gaccagttgaaggatatcatactttcatttaaaaaaagatacctccagacccctcccccc
tattcatcaaaaaggattgaaggtaaaagggcataccagctagcaaagaaaggcattcag
gtgaagttaaagccaaaggaggttacaatttacagcattcagatattaaaaattgagatg
ccctttttcacaataaaagttcactgcagttcaggaacgtacataagaagtcttgtaaaa
gagataggtgataaagcaggatgtggggcatatgtaaaaagcctgaggagaactaaggtt
ggcatttttagtgttgaaaacgctattaaattagaagaacttctaaggatgacagaacag
gatatagaaagtagattaatagatataaaagatgctttatatttttttacagagatttta
ttagatcctgtttttgacgaaagatttataaaagggcagagatttaaggttccttacagt
attaaaggtttagttaaagtacttgataaaaataagagatttcttggtatcggggagatt
aaagaaaaccagatcctacagccagttaaagtttttatttaa
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