Persephonella marina: PERMA_0875
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Entry
PERMA_0875 CDS
T00870
Name
(GenBank) ribosomal large subunit pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmx03009
]
PERMA_0875
Enzymes [BR:
pmx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PERMA_0875
Ribosome biogenesis [BR:
pmx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PERMA_0875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
ACO04000
UniProt:
C0QPR5
LinkDB
All DBs
Position
828920..829879
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AA seq
319 aa
AA seq
DB search
MNHKDEILSFMVDEEYDRKRLDQFLSSVYPEYSRSYFQKLIKDGYVFEDGKDIKKPSYKV
RKGQEITLVIPPPETLEIKPENIPVDILFEDEDIAVVYKPAGMVVHPSPGHTSGTLVNAL
LYHFRNISEYGGKERAGIVHRLDKDTAGLMIIAKSEFAHKELQKQFQERTVDKRYIAVVT
GIVQNDHGFIDLPIGRSIYNRKKMGTEATNLRDALTEYWVKNRSEKENLTVVDIKLHTGR
THQIRVHFSAIGHPLFNDKVYGFKKSQLRSEKMRSISDQTLYHALLAYRIAFDHPRTGEK
IDITLQKLPEHISKVIEAI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcataaagatgagattctcagctttatggttgatgaagagtatgataggaagaga
ctggatcagtttctgtcttcagtttacccggagtactcaagatcttacttccagaaactt
ataaaggatggttatgtttttgaggatggtaaagatattaaaaaaccttcttataaagtc
agaaaaggacaggagataacattggttattccacctccagaaacgctggagataaaacct
gaaaatatacctgttgatatcctgtttgaggatgaagatatagctgttgtttacaagcct
gcaggtatggttgttcatccttctccaggacatacatcaggtactcttgttaacgcactt
ctttaccatttcaggaatatctcagagtacggtggaaaggaaagggctggtatagttcac
aggcttgataaggatacagcaggacttatgataatagcaaagtcagagtttgcacataaa
gagctacagaaacagtttcaggagagaaccgttgataaaaggtatattgccgttgtaaca
ggtatcgttcagaatgatcacggttttatagaccttcctataggaagatcaatatacaac
aggaagaagatgggaacagaggcaacaaatctcagagatgcccttacagagtactgggtg
aaaaatagatcagaaaaggagaatctaacagttgtagatataaaacttcatacaggaaga
acacaccagataagggtacatttctcagctattggtcatccattattcaacgataaggtt
tatggttttaaaaagagccagcttagatcagaaaagatgagaagtatatcagatcagact
ttataccatgcacttttagcttacaggatagcttttgatcatccaagaactggagaaaag
atagatataacccttcagaagttacctgagcatataagtaaggttatagaggctatctga
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