KEGG   Persephonella marina: PERMA_0884
Entry
PERMA_0884        CDS       T00870                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pmx  Persephonella marina
Pathway
pmx00300  Lysine biosynthesis
pmx00470  D-Amino acid metabolism
pmx01100  Metabolic pathways
pmx01110  Biosynthesis of secondary metabolites
pmx01120  Microbial metabolism in diverse environments
pmx01230  Biosynthesis of amino acids
Module
pmx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pmx_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PERMA_0884
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PERMA_0884
Enzymes [BR:pmx01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PERMA_0884
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ACO04279
UniProt: C0QPS5
LinkDB
Position
839641..840996
AA seq 451 aa
MKKVYEKPVITKLETGFMNKFGGSPLYARKIRKDIDGVPVSELVERYGSPLFVISERKLR
ERYRKIYNAFSSRYPNVQFGWSYKTNYLKAVCSVLHQEGAIAEVVSAFEYEKARNLGIDG
KNIIFNGPHKTLDILEKAASEGAMIHIDHFDEIIDLEKIADRLGKKIKVAIRVNMDTGIH
PQWDRFGFNLETGQALDAVKRIATGGKLVLNGLHSHIGTFILEPEAYGKEVEKLVKLAYE
IEDNFGFKIEYLDIGGGFPSKNKLKGTYLPPDVLVPSVEEYAEKITEALYSNLRPGDFPK
LILETGRAIIDEAEYLITTIFASKRLPDGRKAYIADAGVNILFTAFWYKFNIEIDREVQG
TNEPSVIYGPLCMNIDVIDDGTMLPPLERGTRLIISPVGAYNNTQWMQFIEYRPNVVMIM
EDGSVEIVREREDISDIERRERLPEKLRINQ
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaaaaaggtttatgagaagcctgttataacaaagcttgagacaggttttatgaataaa
tttgggggttctcccctttatgcaagaaagataagaaaggatatagacggcgttcccgtt
tctgaacttgttgaaaggtacggctcccctctatttgtgatatctgaaagaaaactgagg
gaaagatacagaaagatatacaacgccttctcatcaagataccctaacgtccagtttggc
tggtcttacaaaacaaactatctaaaggctgtctgctcagtactccatcaggagggggct
atagctgaggttgtctcagcctttgagtatgagaaagcgagaaatctcggtatagatggt
aagaatataatattcaacggtcctcacaaaaccctggatattcttgaaaaggctgcatct
gaaggggcaatgatacatatagatcattttgatgagataattgatcttgagaagattgca
gacagactgggaaaaaagataaaggtagccataagggtgaatatggacaccggtatacac
ccacagtgggacagatttgggtttaatcttgaaacgggacaggctttagatgctgtaaaa
aggatagcaacaggtggaaagcttgttctgaatgggcttcactcacatataggaacattc
atacttgagccagaagcttacggaaaggaagttgagaagcttgttaaacttgcatatgag
atagaggataacttcggtttcaagatagagtatcttgatataggtggtggattcccttct
aaaaacaaactgaagggaacttatcttccaccggatgttctcgttccttcagttgaggag
tatgctgaaaagataactgaggctctgtactcaaatttgagacctggagactttccaaag
cttatacttgagacgggaagagcaattatagatgaggctgagtatcttataaccaccata
ttcgcatcaaaaagacttccagacggaaggaaggcttacatagctgatgctggagtgaac
atcctttttacagctttctggtataagttcaatatagagattgacagagaagttcagggg
acgaacgagccttccgttatatacggacctttatgtatgaatatagatgttatagacgat
ggaacgatgctcccacctcttgagaggggaacaagactgatcatatcacctgtaggagca
tacaacaacacacagtggatgcagttcattgagtacagacctaatgttgttatgatcatg
gaggatggatctgttgagatagtcagagaaagggaagatatctccgatattgaaagaagg
gagagattacctgaaaaacttagaataaatcagtaa

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