Persephonella marina: PERMA_1084
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Entry
PERMA_1084 CDS
T00870
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pmx
Persephonella marina
Pathway
pmx00541
Biosynthesis of various nucleotide sugars
pmx01100
Metabolic pathways
pmx01250
Biosynthesis of nucleotide sugars
Module
pmx_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PERMA_1084 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pmx01005
]
PERMA_1084 (rfaD)
Enzymes [BR:
pmx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PERMA_1084 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pmx01005
]
Core region
PERMA_1084 (rfaD)
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Paralog
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
DUF4802
DUF3120
Motif
Other DBs
NCBI-ProteinID:
ACO04837
UniProt:
C0QQC4
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All DBs
Position
1035030..1035971
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AA seq
313 aa
AA seq
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MVKQPNNILITGGAGFIGSNLALTLQEIYPESKILILDDFSSANFKNLKKFKGEVLACDV
SSDEIFFKADEFQPDLIFHLASITDTTVTDQELMMRKNVDGFKNVLEIAYDNEATVVYAS
SASVYGNVKEHIPLKEDREKSPENVYAFSKYIMDNIAEDFSEKTGLKVVGVRYFNVYGYG
EAHKGKFASMIYQLYRQMKAGKRPRLFKWGEQKRDFVYIKDAVEATILAKEAPHSTVYNV
GSGEARSFNDIVSLLNKYLGLDLQPDYFDCPYDFYQEYTQADMSKIKEELGFVPKYNLEK
GIKEYVDILEGRI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacaaccgaataatattctgataacaggtggagccggatttataggctccaat
cttgctctcactcttcaggagatatatcctgaaagtaagattcttatacttgatgatttt
tcaagtgctaactttaaaaaccttaaaaagttcaaaggtgaggttctagcctgtgatgtc
tcatctgatgagatattctttaaggcagatgagtttcagcctgatctgatattccatctt
gcatctataactgacacaaccgttacagatcaggaacttatgatgaggaagaatgttgat
ggttttaaaaatgtacttgagatagcatacgataacgaagcaaccgttgtttatgcttca
tcagcatctgtttatggaaatgtgaaggagcatatcccattaaaggaagacagggaaaaa
tcacctgagaatgtttatgcattctcaaagtatataatggacaatattgcggaggatttt
tccgaaaaaacaggtctgaaagttgttggagtcagatacttcaatgtttatggttatgga
gaggctcataaaggaaagtttgcgagtatgatataccagctttacagacagatgaaagca
gggaagagacctagacttttcaaatggggagaacagaagagggattttgtttatataaag
gatgctgttgaggcaacaatccttgccaaggaagcacctcattccaccgtttataatgtt
ggaagtggtgaggcaagatcatttaatgatattgtttcccttttgaacaaataccttggt
cttgatcttcagcctgattattttgactgtccttatgatttttaccaggagtatacacag
gctgatatgtcgaagataaaggaagagcttggctttgttccgaagtacaaccttgagaaa
ggtataaaagagtacgttgatatacttgaaggtaggatctag
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