Persephonella marina: PERMA_1110
Help
Entry
PERMA_1110 CDS
T00870
Name
(GenBank) putative eal/ggdef/pas domain protein
Organism
pmx
Persephonella marina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
PAS_8
PAS_3
DUF6364
YfbR-like
RHH_3
Thg1
DUF2111
GHL6
Motif
Other DBs
NCBI-ProteinID:
ACO03699
UniProt:
C0QQF0
LinkDB
All DBs
Position
complement(1062003..1063877)
Genome browser
AA seq
624 aa
AA seq
DB search
MTKKKNILSIAIDKSLQDKLKELSREKHISVSRLVSRLVEEALYLEENVFKDEIYKNIDW
LSQEWKDKLQFLFTKVLDTTPDPIWIKDLNLRIIYVNQAFADLFGLKKEEIIGKSDIEYL
PSEIAKESIFSDMQALEKKQSTHTVEKIEKDGKVRYFDVIKTPLFNKSGKIVAILGISRD
ITNLVETKEELERKNRELLDAYQKLKELHEYDNVTGFMKRNKFIEEFDNLLKSKDRSTLT
VVMIDINNFKYINEIYGFEFGDRLLREISNQLKNFVENIDNTALLGKLSGDEFAVLFKRD
IDLNEIVKRFKEILSQIKLNTPKYHSIYSPKAVYCAVKVEPDITLSAEEIVTHMEVAIFD
LRESKDTDFSIIDLKENISSVELEEKLVKALENKKIVPFLQPVYDFKNDEIIGYEVFARI
EDEGNYIEAKDFITVAYRKDFIVPIDHEILEIVKNEIMPLIEDDKKLFINLSSFSLNKLE
NIADPMAKEIIFIKDRSVFDINEQEFLRNISNITDIKRSYNISFSIDDFGTGNTSFRTLI
RISEEKIISYLKIDGSLMKELGNSEEKKNIVRSIVAACKQLGIKTVAENIENEKIYEAVL
DIGIDCGQGNYLSQPEHYERVLKK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaaaagaacatcttatcaatcgctattgacaaatcattacaggacaaactg
aaggagctttcaagggaaaaacatatctcagtttcaaggcttgtatcaagacttgttgag
gaagctctctatcttgaggagaatgtttttaaggatgagatttacaaaaatatagactgg
ctcagtcaggaatggaaggataagttacagtttcttttcacaaaggttcttgacacaaca
cctgatccgatctggattaaggatcttaacttaagaataatttatgtaaatcaggctttt
gcagatctctttggtcttaaaaaagaggagataataggtaaaagtgatatagagtatctc
ccttcagagatagccaaagagtctatattttctgatatgcaggcccttgagaagaaacag
tcaacacacactgttgaaaagatagaaaaggatggaaaggttagatattttgatgttatt
aaaacgcctctatttaataaatcgggaaagatcgtagctatccttggaatatcaagggat
ataacaaatcttgttgagacaaaggaagagcttgaaagaaaaaacagggagttgcttgat
gcgtaccagaagttaaaggagctccacgagtatgacaatgttacaggctttatgaaaaga
aacaagtttatagaagagtttgataatctgcttaaaagcaaggatagaagtacgcttaca
gtggttatgattgatataaataactttaaatatataaacgagatatacggatttgagttt
ggagacaggcttttaagggagatatcaaatcagcttaagaactttgttgaaaatatagat
aatacagctttactcggaaagctaagtggtgacgagtttgcggttctttttaaaagagat
atagatctgaatgagattgtaaagagattcaaggagatactatcccagataaagctaaac
acacctaagtaccattccatatactcaccaaaagctgtgtactgtgctgtaaaggtagaa
cctgatatcacactttcagctgaagagatagttacacatatggaggttgcaatttttgat
ctcagagaaagtaaggatactgacttttcaataatagatcttaaggagaatatatcatct
gttgagcttgaggagaagctggttaaagctcttgaaaacaagaagatagttccattttta
cagcctgtttatgattttaaaaatgatgagattataggatatgaggtctttgcaagaatt
gaggatgaaggaaactacatagaagcaaaggatttcataactgtagcctacagaaaggat
tttatagttcctattgatcacgagattctggagatagttaaaaatgagataatgcctctt
attgaggatgataaaaagctgtttataaatctcagctcattttcacttaataagctggaa
aatatagctgatcctatggctaaagagataatctttattaaagacagatctgtttttgat
ataaatgaacaggaattcctgagaaatataagcaatataactgatattaaaagaagttat
aacatatccttctctattgatgattttggaacgggaaatacatcattcagaacgcttata
agaatatctgaggaaaagataatttcgtatcttaagatagacggttcccttatgaaggag
cttggaaactctgaagagaaaaagaatatagtcagaagtatagtcgctgcatgtaaacag
cttggtataaagactgtagctgaaaatatagagaatgaaaagatatacgaggctgtcctt
gatataggtatagactgtggacagggtaattatctttcacagcctgagcattacgaaaga
gtgttgaaaaagtga
DBGET
integrated database retrieval system
