Persephonella marina: PERMA_1167
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Entry
PERMA_1167 CDS
T00870
Name
(GenBank) long-chain-fatty-acid CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmx
Persephonella marina
Pathway
pmx00061
Fatty acid biosynthesis
pmx01100
Metabolic pathways
pmx01212
Fatty acid metabolism
pmx02024
Quorum sensing
pmx04146
Peroxisome
Module
pmx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PERMA_1167
00071 Fatty acid degradation
PERMA_1167
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PERMA_1167
09145 Cellular community - prokaryotes
02024 Quorum sensing
PERMA_1167
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmx01004
]
PERMA_1167
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmx04147
]
PERMA_1167
Enzymes [BR:
pmx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PERMA_1167
Lipid biosynthesis proteins [BR:
pmx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PERMA_1167
Exosome [BR:
pmx04147
]
Exosomal proteins
Exosomal proteins of breast milk
PERMA_1167
Exosomal proteins of breast cancer cells
PERMA_1167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C_3
DUF7080
AMP-binding_C
Ribosomal_L50
Peripla_BP_2
PP-binding_2
Motif
Other DBs
NCBI-ProteinID:
ACO04933
UniProt:
C0QQK3
LinkDB
All DBs
Position
complement(1117510..1119951)
Genome browser
AA seq
813 aa
AA seq
DB search
MIYIHKDSQLIAGNKIINHPQIEKNIDIFSSKLVIKKDDRVCIFSENRPEWIYSFFGIWK
KGGIPVPIDFMSVEEEVSYILGDSEPSYIFCSKERYPTVEKALNILKKDIPVIIFEDLKT
EGIKESIREITVSEEDTAVILYTSGTTGPPKGVMLSYKNLLSNIKSIHETEIADSSDKTI
AILPFHHSYPLMVSMLVPLTLGATIIFLEKLSSEEILNLMKKHKVSILIGVPRLYTLFHR
KIFEKINSNLITRTLFNITKTINNQSLSRVIFSKVHKTFGGNIKYFVSGGAKLDEDIAKD
LWALGFKIVEGYGLTETSPIVSFNPPEKIKLGSVGKPIKGVHVKIKDGEIIVKGDNVMKG
YYKKPEKTAEVIKDGWLYTGDLGYLDDEGYLYVTGRKKDIIVLPTGKNINPEEIESKILK
VSDLVKEVAVMMKDGQLFALVYPDFQKISQSGVLNIEETIKWNVIDKYNLTVPDYKRIYR
FKIVKRELPKTRLGKIRRFLLDRFLEEEKVIKREVKEPDLEEYRILKEYLKKVSKKDIYP
DSHIELDLGLDSLEKVELQAFIEKTFGIEITDQQLSNLQTVEELSRYISEKKKKIEFEEI
NWKKLFEKEVKIDIKETELPVLILKKVTKPVFKAYFSLEVKGLENIPSENFILAPNHQSL
LDGFFLIASLPDKNLVDTYFLAEEIYFRSPLRKLLAKYFHILTVNINRDLKLSLQKTATL
LKKGKNVVIFPEGARTRDGKLLPFKKSFAILSKELNIPVVPVAIKGAYNVFPIGSRFPKP
GKVTITFLKPVYPEGKTEDQIVNETYTEISKNI
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgatatatatccataaggactcacagcttatagcaggtaataagattatcaaccatcct
cagattgaaaagaacatagatattttctcatcaaaattagttataaaaaaagacgatcgg
gtatgtattttctcagagaacagacctgagtggatatacagctttttcggcatatggaaa
aaagggggaatccctgtcccgatagattttatgtccgttgaggaagaagtctcgtacata
ttgggagatagcgaaccttcctatatattctgttcaaaagagaggtatccaaccgttgaa
aaggccctgaatattctaaaaaaggatataccggttatcatctttgaagatcttaaaaca
gaaggcataaaggaaagtatcagagagataaccgtctcagaagaagatacagctgtgata
ctgtacacatcggggacaacaggtcctccaaaaggtgttatgctctcgtataaaaatcta
ctttcaaacataaaaagtatccatgaaacggagatagctgacagctctgacaaaacgata
gccatccttccttttcatcattcctaccctttaatggtatcaatgcttgtcccattaaca
cttggtgcaacgataatatttcttgagaagctatcctccgaagagatactcaaccttatg
aaaaaacataaagtatcaatacttataggtgttccccgtctttacacactttttcacaga
aagatatttgagaagataaacagcaacttgataaccagaacactttttaatataaccaaa
acgataaacaaccagagtttaagtagagttattttcagtaaagttcataaaacatttgga
ggtaatatcaaatattttgtaagcggtggagcaaagcttgatgaggatatagcaaaggat
ctttgggctcttggatttaagatcgttgaaggttacggacttacagaaacatctcctatc
gtttcatttaacccaccagaaaagataaaacttggatccgttggaaagcctataaaaggt
gttcatgtaaagataaaagatggtgagataattgtaaaaggcgacaatgttatgaaaggt
tactacaaaaaacctgaaaaaacagcggaggttataaaggatggatggctttacacaggt
gatttaggttatctggacgatgaaggatatctttatgttacaggaagaaagaaagatatt
attgtgcttccaacaggaaaaaatataaatcctgaggagatagaatcaaagatcttaaag
gtatcagatcttgtaaaggaagttgctgttatgatgaaggatgggcagctttttgcgctc
gtttatccggacttccagaagatatcacagtcaggagttctgaatatagaggaaactata
aaatggaatgttatagacaaatacaatcttacagtcccagattataaaaggatatacaga
ttcaagatagtaaagagggaacttccaaaaacaaggcttggaaagataaggagattcctt
ttagacagatttcttgaagaagaaaaagtaataaaaagagaggtaaaagagcctgatctt
gaggagtacagaatcttaaaggaatatctgaaaaaggtcagtaaaaaggatatctatcct
gacagccatattgagcttgatcttggacttgattcacttgagaaggttgaacttcaggcc
tttattgagaaaacatttggtattgagataacggatcagcagttatcaaatctccagact
gtagaagagctttccagatacatatcggagaagaaaaagaagatagagtttgaggaaata
aactggaaaaagttatttgaaaaagaggtgaagattgatataaaagagacagaactacct
gtattaattctgaaaaaagttacaaagcctgtatttaaagcctacttctcattagaggtg
aagggactggaaaatataccttcagaaaactttatacttgcaccaaatcaccagtcttta
cttgacggttttttccttatagcctcacttccagataaaaatcttgtagatacatacttc
cttgctgaggagatatactttagatctcctttaagaaaactcctggcaaaatacttccat
atactcacagtaaacataaacagagatctgaagctatcgctccagaaaacggcaacactt
ttgaagaaagggaaaaatgttgtgatattccctgaaggggcaagaacaagggatgggaaa
cttctgcctttcaaaaagagttttgcgatcctcagtaaagaattaaacatacctgttgtt
cctgttgctataaaaggtgcttataatgttttccctatcggctcaagatttccaaaacct
ggtaaggttacaatcactttcttaaagcctgtgtatccggagggtaaaacggaagatcag
attgtaaatgagacttacacagagatatcaaaaaatatttag
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