KEGG   Persephonella marina: PERMA_1307
Entry
PERMA_1307        CDS       T00870                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme R protein (HsdR)
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pmx  Persephonella marina
Brite
KEGG Orthology (KO) [BR:pmx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmx02048]
    PERMA_1307 (hsdR)
Enzymes [BR:pmx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PERMA_1307 (hsdR)
Prokaryotic defense system [BR:pmx02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PERMA_1307 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD Sll1247_N T1RK_2nd AAA_22
Other DBs
NCBI-ProteinID: ACO03954
UniProt: C0QQY2
LinkDB
Position
complement(1223563..1226724)
AA seq 1053 aa
MQIIKVNQRERETQNRVVKFFQEALGYDYLGNWEKRENSSNIEEEYLTNFLKKQGYKDKI
INKAISELKKIATNQQKSLYDKNKEIYNLLRYGISIKPNPSEQSVHVDFIDWENPENNHF
AIAEEVTIKGKHTKRPDIVIYINGIAVGVLELKRSRISISEGIRQNLDNQKKEFIQDFFS
TIQLVMAGNDTQGLRYGTIETPERYYLEWKEENPEFDHNKKQNIPRTLPRDKCEKSNNIL
DCDIYRLLNKKRLLEIIHDFVVFDAGIKKLPRHNQYFGVKAAQRSLKQREGGIIWHTQGS
GKSLTMVWLAKWILENNPNGRVLIITDRVELDEQIEKVFKGVGEDIYRTKSAKDLLDQLN
KTEERLICSLIHKFGRAEVTDKDYDEYIEALRKDLPKDFKAKGDIIVFVDECHRTQSGKL
HKAMKEFLPNAIFIGFTGTPLLKKDKPTTLETFGKYIHTYKFDEAVNDEVVLDLRYEARD
VDIKVVSKEKIDKWFETKTKGLSDIAKAQLKQRWGTLKKLYSSKDRMEKIVADIIFDFEI
RPRLASGRGNAMLVAGSVYEACKYYEIFKSKGFNKLAIVTSYRPSITSIKGEETGEEGEA
EQLKKYEVYKKMIAEYYNISEDEAVKDYWIDKFEKDVKKKFIDEPGQMKLLIVVDKLLTG
FDAPSATYLFIDKPMKDHGLFQAICRVNRLDDKDKGDEFDKDYGYIVDYRDLFNSMEKAI
KDYTSGAFAEFEKEDVKGLIKDRLTEAKKKLDELLEQLDLITESVKHPKGINEYRDYFIG
DNSEKKQQLRLEFYKKVSSLIRTYTNVANELDEIGYSKKEQEEIKKKVEHYTAVRDELKL
ISSDYLDLKVFDPAMRYLIDTYISAEESKTLALFEDTSLLEIVALEGIKSAIEKLPRTIG
KSKEAIAEVIENNIRKLITDEREVNPIYYEKMSQILEELVAKRKKEVIDYESYLKEIEKL
TKMLLKLEDEENPYPESIKDSKAKRAIYDALDGFENREVLTNKLDEVIINAKQDSWRGNV
IKERRIKNAIYKVLHNRELTEKIFELVLKQEEY
NT seq 3162 nt   +upstreamnt  +downstreamnt
atgcaaattataaaagtaaatcaaagggaaagggaaacacaaaatagagttgtaaaattt
tttcaagaagccttaggatatgattatcttggaaattgggaaaaaagagaaaatagttca
aatatagaggaagaatatttaactaactttctaaaaaagcaaggttataaagataaaata
ataaacaaagcaataagcgaactaaaaaaaattgccacaaaccagcaaaaaagtttatac
gacaaaaataaagaaatttacaacctactaagatatggtataagtattaaaccaaatcct
tcagagcaatctgttcatgttgattttatcgattgggaaaaccccgaaaataaccacttt
gctatagctgaagaagtaactatcaaaggaaaacacaccaaaagacctgatattgtgatt
tatataaatggaatagctgttggagtgttagagctaaaaagatcaaggatatctatatct
gaaggaatcaggcagaatttagataatcagaaaaaagaatttatacaggactttttttca
acaatccaacttgttatggctggaaatgatactcaaggacttagatatggaacaatagaa
accccagaaaggtattatttagaatggaaagaagaaaatccagaatttgaccataataaa
aagcaaaatatcccaagaacattgccaagagataaatgtgaaaaatctaataatatttta
gattgtgatatttacagactcttaaacaaaaaaagactacttgagataatccatgatttt
gttgtttttgatgctggaataaaaaaattgccaagacataaccaatattttggagtaaaa
gcagcccaaaggagtttaaagcaaagagaagggggtattatctggcatactcagggtagc
ggtaaatccttaacaatggtatggcttgcaaaatggatacttgaaaataatccaaatggt
agagttctaataataacggacagagttgaacttgatgaacagattgaaaaggtttttaaa
ggagtgggcgaagatatctatagaacaaaatcggctaaagacttattggatcaacttaat
aaaacagaagaaagactaatatgttctttaattcataaatttggtagagctgaggtaaca
gataaggattatgatgagtatatagaagcgcttagaaaagacttacccaaagactttaaa
gcaaaaggagatataattgtctttgtagatgaatgtcatagaactcaatcaggaaaatta
cacaaagcaatgaaagagtttttacctaatgctattttcatcggttttacaggaacacct
cttttaaagaaagataaacccacaacattagaaacattcggaaaatatattcatacctac
aaatttgatgaagctgttaatgatgaggttgttcttgatttgagatatgaagcaagggat
gtggatataaaggttgtttcaaaagaaaaaattgataaatggtttgaaactaaaactaaa
ggtttatcagatatagctaaagcccagttaaagcaaagatggggaacccttaaaaaacta
tatagctcaaaagatagaatggaaaaaatagtggcagatataatttttgactttgaaata
agacccagacttgcatcaggtagaggaaatgcaatgcttgttgctggaagtgtatatgaa
gcttgtaagtattatgaaatttttaaatcaaaaggatttaacaaattagccatagttaca
tcatacagaccaagtattacgagtataaaaggagaagagactggagaggaaggagaagca
gagcaactaaaaaaatatgaagtctataaaaagatgatcgctgaatattataatatttct
gaagacgaagcagtaaaagattattggatagataagtttgaaaaagatgtaaagaaaaaa
tttatagatgagcctggacagatgaaacttttaatagtagtagataaacttttaacaggt
tttgatgctccaagtgctacttatctttttatagacaaacctatgaaggatcacggatta
tttcaagcaatatgcagagtaaatagacttgatgataaagataaaggagatgagtttgat
aaagattatggctatatagttgattatagagatttattcaattctatggaaaaagctata
aaagattatacttctggagcttttgctgaatttgaaaaagaagatgtaaaaggattaata
aaagatagactaacagaagccaagaaaaaattagacgaattattagaacagcttgattta
ataacggagagcgtaaaacatccaaaaggtataaatgaatacagagattacttcattggc
gataactctgaaaaaaaacagcaattaagacttgagttttataaaaaggtttcttcttta
atcagaacatacacaaatgtagctaatgagcttgatgaaataggttatagcaaaaaagaa
caagaagaaataaagaaaaaggtagaacattatacagctgtaagagatgaacttaaacta
ataagtagtgattatttagacctaaaggtatttgaccctgcaatgagatatctgattgat
acctatataagtgcagaagaaagcaaaacattagctttatttgaagatacatctctgcta
gaaattgttgcattagaaggaataaaaagtgctattgaaaagcttccaagaaccataggc
aaaagtaaagaagcgattgctgaagtaatagaaaataacataagaaagcttataacagat
gaaagagaagttaatcctatttattatgaaaaaatgtcccagatactagaggaactggta
gccaaaagaaaaaaagaagttattgattatgaaagttatttaaaagaaatagaaaaatta
acaaaaatgcttttaaaattggaagatgaggaaaatccttatccagaaagtataaaagat
agcaaagcaaaaagagctatttacgatgctttagatggttttgaaaacagagaagtactt
acaaataaattagatgaagtaatcataaatgctaaacaagattcgtggagaggaaacgta
ataaaagaacgaagaataaaaaatgcaatctataaagttttacataatagagaacttact
gaaaaaatctttgaattagtcttaaaacaagaagagtactaa

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