KEGG   Persephonella marina: PERMA_1338
Entry
PERMA_1338        CDS       T00870                                 
Name
(GenBank) crispr-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
pmx  Persephonella marina
Brite
KEGG Orthology (KO) [BR:pmx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmx02048]
    PERMA_1338
Enzymes [BR:pmx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PERMA_1338
Prokaryotic defense system [BR:pmx02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    PERMA_1338
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C Cas3_HD HD P-loop_SecA DUF447_C RBD_DGKtheta
Other DBs
NCBI-ProteinID: ACO04366
UniProt: C0QR11
LinkDB
Position
1259969..1262218
AA seq 749 aa
MRKIYAKIYYKDGKPVPETLEEHTENLLIELEKLKNIYGRDIVINEDFWENLKFACLFHD
LGKVSDNFQSKLKRIVGEKIPRGVDKEIPHNFLSGIFLYSKSIRKLIPREFFDYIFYAVV
FHHDREINFDSNYLKEVVEKDISKKADLLNWLEKYSIVIDRVDPDRSGILFKKIKEFKYS
EHEKTKEVKRSKYFILLKGLLHRLDHSASAKVNVEEERIKNPREKLIQKLSKKENFTGLK
PFQEKAKDYENENILLTASTGMGKTEFAINWIGESKAFYTLPVRVSVNAMYDRFVNYFGK
DKIGLLHSDAVFYGFDKYEKFEDNLSIEEHIIRTQATRQFAMPITITTADQLFTATFKYP
GYEKVYATLAYSKIVLDEPQSYSPDTLAIIIKGLQEISELGGKFCFMSATIHPFIRERLK
DYCRILDAVFNTEKKHKITLLDNSLEETTEKIKDLYKKGKKVLVILNTVKKSQEIYKLLK
DDKTNVKLLHSLFINRDRKEKEDQIKENFKTEQPVIWITTQLVEASLDIDYDVLFTEIAT
LDALIQRMGRVNRRKGRTIDENSSPNIFIALNNPSDQGKIYNKNIVELTKEALKNYEGEI
LTEEIKQSLMEEVYNEEKIKSTKFYEKFEKNLELLEYGYQADTKGEAQKLFREVLNINVI
PEKILNENYTQIDNLINQILDKSIPYPERLKSIHKLNSFTLGLPIFRIKDQIPTDITPPK
MRNKIFSVNFDYNSELGLIIESQQLGEIL
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgaggaaaatttatgcaaaaatctattacaaagacggaaaaccagttccagaaacttta
gaggaacatacggaaaatcttctgatagagcttgaaaagctaaaaaatatatacggcaga
gatatagtaattaatgaagatttttgggaaaatttaaaatttgcctgtttatttcatgat
ttaggaaaagtatctgataattttcaaagtaagttgaagagaattgtaggtgaaaaaatc
cccaggggagtggataaagaaatacctcataattttctgtctggaatatttttatattca
aaatcaataagaaaattaataccaagagagttttttgattatattttttatgctgtagtt
tttcaccacgatagagagatcaattttgatagtaattatcttaaggaagttgtggaaaag
gatatttcaaaaaaagctgatttactaaactggctggaaaagtattcaatagttatagac
cgtgttgacccagacagatcagggattctttttaagaaaataaaagaatttaaatatagt
gaacatgaaaaaacaaaagaagttaaaaggtctaaatacttcatactactaaagggatta
cttcaccgtcttgaccactcagcatctgcaaaagtaaatgtggaagaagaaagaataaaa
aatccaagggaaaaactaatacaaaaactttctaaaaaagaaaattttacaggactaaaa
ccatttcaggaaaaagcaaaagattatgagaatgaaaacatacttttaaccgcttcaaca
ggaatgggaaaaacagagtttgctataaactggataggtgaaagtaaagcattttatact
ttgcctgtcagggtatctgttaacgcaatgtatgataggtttgttaactatttcggtaaa
gataaaataggacttcttcacagcgatgctgttttttatggatttgataaatacgaaaag
tttgaggacaacctatcaatagaagagcatataattagaactcaggcaacaagacagttt
gctatgccgataacaataaccactgctgaccagttatttacagctacatttaaatatccg
ggatatgaaaaggtatatgctacacttgcatactccaaaatagttttagatgagccacaa
agctattctcctgatacattagcaataataatcaaaggtcttcaggaaatatctgaactt
ggtgggaagttttgctttatgagtgctaccatacatccgttcataagggaaagattaaag
gattactgtcgtatattagacgccgtttttaatacagaaaaaaagcataaaattacctta
ctggataactctttagaagaaacaacagaaaaaataaaagatctgtataaaaaaggcaaa
aaagtcttagtgatcctgaacaccgtaaaaaaatcacaggagatatacaaattacttaaa
gatgataaaaccaatgtaaaacttcttcactcactatttataaacagggacagaaaagaa
aaagaagatcagataaaagagaatttcaagacagaacaaccagtcatctggataacaact
caacttgtagaggcatctctggatatagattatgacgtcttatttactgaaatagctact
cttgatgcattaatacagagaatgggaagagtaaacagaaggaaaggcagaacaattgat
gaaaacagttctccaaatatatttattgccttgaacaacccatcagatcagggaaaaata
tacaataaaaatattgtagagttaacgaaggaagctttaaaaaactatgaaggagaaata
ctgacagaagagataaaacagtcattaatggaagaagtttataatgaagaaaaaataaaa
agcacaaagttttatgaaaagtttgagaagaacttagaattattggaatacggttatcag
gcagataccaaaggagaagctcaaaaattatttagagaggtcctaaatataaatgtaatt
cccgaaaagatacttaatgaaaattatacacagatagataatctgattaaccagattttg
gacaagtcaataccatatccagagagattaaagagcattcataaattaaactctttcact
ttaggtcttccaatcttcagaataaaagaccagatcccaacagacataacaccacctaaa
atgaggaacaaaatattttccgtaaattttgattataatagcgaactcggattaattatt
gaaagtcagcaacttggtgaaattttataa

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