Persephonella marina: PERMA_1428
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Entry
PERMA_1428 CDS
T00870
Symbol
hfq_2
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pmx
Persephonella marina
Pathway
pmx02024
Quorum sensing
pmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PERMA_1428 (hfq_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PERMA_1428 (hfq_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmx03019
]
PERMA_1428 (hfq_2)
03036 Chromosome and associated proteins [BR:
pmx03036
]
PERMA_1428 (hfq_2)
Messenger RNA biogenesis [BR:
pmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PERMA_1428 (hfq_2)
Chromosome and associated proteins [BR:
pmx03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PERMA_1428 (hfq_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Rad1
Motif
Other DBs
NCBI-ProteinID:
ACO03153
UniProt:
C0QRA0
LinkDB
All DBs
Position
1345523..1345762
Genome browser
AA seq
79 aa
AA seq
DB search
MAKKKGRLQEQFLNAIRKEKVRVNVYLVNGVKLEGKIRYFDPFTILLKEGPRQVLVYKHA
ITTVIPKREIEFELEEEQQ
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaagaagggaaggttgcaggaacagtttttgaacgctataagaaaggaaaag
gtaagggttaatgtgtatcttgtgaacggtgttaagctggaaggaaagataaggtacttt
gatcctttcacaattcttttaaaagagggaccaagacaggttttagtatataaacatgca
ataacaacagtcattcctaaaagagaaatagagtttgagttagaagaagaacagcagtaa
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