KEGG   Persephonella marina: PERMA_1428
Entry
PERMA_1428        CDS       T00870                                 
Symbol
hfq_2
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pmx  Persephonella marina
Pathway
pmx02024  Quorum sensing
pmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PERMA_1428 (hfq_2)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PERMA_1428 (hfq_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmx03019]
    PERMA_1428 (hfq_2)
   03036 Chromosome and associated proteins [BR:pmx03036]
    PERMA_1428 (hfq_2)
Messenger RNA biogenesis [BR:pmx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PERMA_1428 (hfq_2)
Chromosome and associated proteins [BR:pmx03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PERMA_1428 (hfq_2)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM Rad1
Other DBs
NCBI-ProteinID: ACO03153
UniProt: C0QRA0
LinkDB
Position
1345523..1345762
AA seq 79 aa
MAKKKGRLQEQFLNAIRKEKVRVNVYLVNGVKLEGKIRYFDPFTILLKEGPRQVLVYKHA
ITTVIPKREIEFELEEEQQ
NT seq 240 nt   +upstreamnt  +downstreamnt
atggcaaagaagaagggaaggttgcaggaacagtttttgaacgctataagaaaggaaaag
gtaagggttaatgtgtatcttgtgaacggtgttaagctggaaggaaagataaggtacttt
gatcctttcacaattcttttaaaagagggaccaagacaggttttagtatataaacatgca
ataacaacagtcattcctaaaagagaaatagagtttgagttagaagaagaacagcagtaa

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