Persephonella marina: PERMA_1506
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Entry
PERMA_1506 CDS
T00870
Name
(GenBank) type IV pilus assembly protein TapB
KO
K02652
type IV pilus assembly protein PilB
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmx02044
]
PERMA_1506
02035 Bacterial motility proteins [BR:
pmx02035
]
PERMA_1506
Secretion system [BR:
pmx02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
PERMA_1506
Bacterial motility proteins [BR:
pmx02035
]
Pilus system
Pilus assembly proteins
PERMA_1506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
AAA_29
nSTAND3
AAA_23
PELOTA_1
AAA_30
cobW
Gag_p10
AAA_14
DEAD
AAA_11
AAA_7
AAA_19
DUF6568
AAA_18
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACO04297
UniProt:
C0QRH8
LinkDB
All DBs
Position
complement(1448124..1449857)
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AA seq
577 aa
AA seq
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MENVDYKSRRKLTFLRLMVQNGLVPAEEVRDNPALSGKDFTEILDYLVDRKITDEVKIKD
FFVKFLNLKPYDPEEHYLDKNNDVVKTISYKYMKKKKFVPLFYKDGTLSIAAFNPIDKEI
VQYLKFLGIKNIDVYVATLSEINNLLNQIAPDTSAEELISSFGLDAEVEEEIQKEEDINV
AEVLAGAEEAPIVKASRLFIVNAVRQGASDIHIEPFEKELRVRYRIDGILRTVQKLPSTV
KEALVARYKIMANLDIAEKRLPQDGRIRVKIDKKPIDLRVSIVPTVYGEKVVMRIQDAES
YLGLKLEDLGFEPDDLEKIRRAIYNPWGMVLVTGPTGSGKTTTLYTALMERNTEDVNIST
AEDPVEVSIPGINQVQIKEHIGLTFAEALRAFLRQDPDIILVGEIRDRETAEISIKAALT
GHLVFSTLHTNDAPSSITRLIDIGVESFLVGTAVNLILAQRLIRKLCKHCRKPATYPPEF
WKGLGFSDEDIKNGEFYTHNPNGCEKCNRTGYKGRTAVHEILEVDDEIRKAILSGANAAQ
LRELAIKKGMRTLYKNALLKVKRGITDIAEVERVLMK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtagactacaaaagccgcaggaaattaaccttcctcagattaatggttcaa
aatggtctcgttccagctgaggaggtaagagacaatcctgcactcagtggaaaggatttt
acggaaatacttgactaccttgtagacagaaagataacagatgaggtaaagataaaggac
tttttcgttaagtttctgaatctaaagccctacgatcctgaagagcattacttagataag
aataatgatgttgtcaaaacaatatcttacaaatatatgaaaaagaaaaagtttgtcccc
cttttttacaaggatgggacgctttccatagcagcattcaaccctattgataaagagata
gtccagtatctcaaattcttgggtataaaaaatatagatgtttatgttgcaacactttcc
gagataaacaatcttctgaaccagatagctcccgacacatcagctgaagagcttataagc
agttttggacttgatgctgaggtggaggaggagatacagaaagaggaagatataaatgtc
gccgaggttttagctggggctgaagaggctcctatagttaaggcatcaaggctttttata
gtgaatgctgtaagacagggtgcttcagatatacatatagagcctttcgagaaagagcta
agggtaagatacagaattgacggaatactgagaacggttcaaaaacttccatcaaccgtt
aaagaagcccttgtcgcaagatacaagataatggccaatcttgatatagctgaaaaaagg
cttccccaggatggaagaataagggtaaagatagataaaaaacctatagatctcagggtc
tcaatcgttcctacagtttacggtgaaaaggtcgttatgagaattcaggacgcagagtcc
tatcttggtctgaagcttgaggatttaggttttgaacctgacgatctagaaaagataaga
agggctatatacaatccgtggggaatggttcttgttacaggtccaacaggatctggtaaa
acaacaacactttatacagctcttatggagagaaatacagaggatgtgaacatatcaaca
gctgaagatcctgttgaggtatcaataccggggataaatcaggttcagataaaagaacat
ataggtctgacatttgctgaagctctcagggcatttttaagacaggatcctgatatcata
cttgttggtgagatcagggacagggaaacagctgagatatcaataaaagctgcacttaca
ggacaccttgtattttcaacacttcacacaaatgatgcaccatcatctataacaagactt
attgatataggtgttgagagcttccttgttgggacagctgtaaatcttatacttgcccag
agattaataagaaaactatgtaaacactgcagaaagcctgcaacatacccacctgagttc
tggaaaggtcttggtttctcagatgaggatataaaaaatggtgagttttacacacataac
ccaaatggctgtgaaaaatgtaacagaacagggtataagggaagaacagctgttcatgag
atacttgaggttgatgatgagataagaaaggctattctctcaggggcaaatgcggcacag
ctaagagagcttgctataaaaaaaggtatgagaacactatacaaaaatgccctgctgaaa
gtaaaaagaggtattacagatatagcagaggtggaaagggttttaatgaaataa
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