Persephonella marina: PERMA_1760
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Entry
PERMA_1760 CDS
T00870
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pmx
Persephonella marina
Pathway
pmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PERMA_1760 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmx03400
]
PERMA_1760 (ruvB)
Enzymes [BR:
pmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PERMA_1760 (ruvB)
DNA repair and recombination proteins [BR:
pmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PERMA_1760 (ruvB)
RecFOR pathway proteins
PERMA_1760 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_3
Sigma54_activat
MCM
Mg_chelatase
AAA_14
DUF815
AAA_18
nSTAND3
AAA_22
RNA_helicase
AAA_2
NTPase_1
Rad17
Zeta_toxin
NB-ARC
Sigma54_activ_2
NACHT
TsaE
DUF1885
AAA_17
IstB_IS21
ABC_tran
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACO04608
UniProt:
C0QS78
LinkDB
All DBs
Position
1702258..1703223
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AA seq
321 aa
AA seq
DB search
MEILREESFDIDLRPKSIDDYIGQDEVKKQIKIFVDASKKTGKTLDHILIGGPPGLGKTS
LAQVIARELGKNIVFTSGPVLEKKGDIAGILSSLEEGDILFIDEIHRLNPSVEEALYPAM
EDFCLDIIIGKGSSSRSVRIDIPPFTLIGATTRSGMLTSPLISRFGIILHIDYYDTDSLT
RIVLRSAKILGIKITENGAREIARRSRGTPRIANRFLKRVYDFAVVKKDGTVTEDTAREA
LDFLGIDSYGLDSRDRKYLQIIIEKFNGKPVGLNTLSSALSEDRYTIEEIIEPFLLRSGF
IERTPKGRKPTDKALKIFKKI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcttaagggaagagagctttgatatagatctcagacctaaaagtatagatgat
tatataggtcaggatgaggtaaaaaaacagataaagatatttgttgatgcctcaaaaaaa
acaggtaaaacacttgatcatatacttataggcggtccacctggacttgggaaaacatca
cttgcacaggttatagccagggagctggggaagaatattgtgttcacctcaggtcctgtc
cttgagaagaagggagatatagctggtatactctcctcacttgaggagggggatatactc
tttatagatgagatccatagactcaatccttctgtagaggaggctttatatcctgcaatg
gaggatttctgccttgatataatcataggaaagggaagcagttcaagatctgtaaggata
gatataccaccttttacgctgataggagcaacaacaagatcagggatgttaacatccccc
ttaatatcaagatttgggataatacttcatattgattattacgatacggattccctaaca
aggatagtcttaagatctgcaaagatactcggtataaagataacagaaaatggggcaagg
gagatagcaagaaggtcaaggggaactccaagaatagcaaacagatttttaaaaagggtt
tacgactttgctgttgtaaaaaaagacggaactgtaactgaagatacagcaagggaggcg
cttgattttttaggaatagacagttacggtcttgacagcagggacagaaagtatctccag
ataataattgaaaagttcaacggaaaacctgtaggtctcaacactctctcttcagctctg
tcagaggacaggtacacaatagaggagataattgagccgtttcttttaagatcaggtttt
atagagagaacaccaaagggtagaaagccgacagataaagccttaaaaatattcaaaaaa
atttga
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