Persephonella marina: PERMA_1764
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Entry
PERMA_1764 CDS
T00870
Name
(GenBank) ribonuclease Z (RNase Z) (tRNase Z) (tRNA 3endonuclease)
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmx03016
]
PERMA_1764
Enzymes [BR:
pmx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PERMA_1764
Transfer RNA biogenesis [BR:
pmx03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PERMA_1764
Prokaryotic type
PERMA_1764
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
DUF6138
Lactamase_B
PDEase_II
Ocnus
Motif
Other DBs
NCBI-ProteinID:
ACO04618
UniProt:
C0QS83
LinkDB
All DBs
Position
complement(1707088..1708071)
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AA seq
327 aa
AA seq
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MAKPRIKHYLINERTDDPGIVIEIESLGEYILFDVGNIRRLDRHLLRKITKVFITHTHMD
HFIGFDHLLRNKLGKPHTVDIFGISPIADNLYCKLQGYTWNLVEYEPQLVFNLKQWNEGR
FEYYSYDIKKKFAKDFIKEEKAENDIIYEDQNYRVRFAVLDHKINVLGYSFEYKEKLYLK
KEKIKELPLKGKEIGDFKRFLEDEKNRGKNFQIAGKEYSYEYLKDQFSYTLPGYKISYVT
DVIYSEENRKKIVQLVKNSDILYCEAVFLPEDKEQASKVFHLTADQTGKIAKEAEVKKLV
VFHFSRRYGKNSYRIIEEAKKIFPETY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccaaggataaaacattatctgataaatgagagaactgacgatccaggtata
gttattgagatagaaagtcttggagagtatatactttttgatgtcggaaatataagaagg
ctggacagacatcttttaagaaagataacaaaggtatttataacccacacacatatggat
cattttataggctttgaccatctactcagaaacaaacttggaaaaccacatacggttgat
atctttggtatttcaccaatcgctgataatctttactgtaaactgcaggggtacacatgg
aatctcgttgagtatgagccccagcttgttttcaatcttaaacagtggaatgagggaagg
tttgagtactatagctatgatataaagaaaaagtttgcaaaggattttataaaagaggag
aaggctgagaatgatatcatttacgaagatcagaactacagagttagatttgccgttctg
gatcacaagataaatgttctcggttattcctttgagtacaaagaaaaactatacctgaaa
aaagaaaagatcaaggaactgcctttaaaaggaaaggagataggtgattttaagagattt
ttagaggatgaaaaaaacaggggaaaaaatttccagatagctggaaaagaatacagttat
gagtaccttaaggatcagttcagctacacactcccaggatacaagatatcctatgtaaca
gatgttatatactctgaagaaaacaggaaaaagatagtccagcttgtgaaaaactctgat
attctttactgtgaagctgtttttctacctgaagacaaagaacaggcctcaaaggttttc
catctaacagctgaccagacaggtaagatagcaaaggaagcagaggtcaaaaagcttgta
gtttttcatttctcaaggagatatggaaaaaacagctacagaataatagaagaggcaaaa
aagatatttccggagacctactga
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