Persephonella marina: PERMA_1789
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Entry
PERMA_1789 CDS
T00870
Name
(GenBank) DNA-binding protein HU 1 (DNA-binding protein II) (HB)
KO
K03530
DNA-binding protein HU-beta
Organism
pmx
Persephonella marina
Brite
KEGG Orthology (KO) [BR:
pmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmx03032
]
PERMA_1789
03036 Chromosome and associated proteins [BR:
pmx03036
]
PERMA_1789
03400 DNA repair and recombination proteins [BR:
pmx03400
]
PERMA_1789
DNA replication proteins [BR:
pmx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PERMA_1789
Chromosome and associated proteins [BR:
pmx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PERMA_1789
DNA repair and recombination proteins [BR:
pmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PERMA_1789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
SSPI
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ACO04571
UniProt:
C0QSA6
LinkDB
All DBs
Position
complement(1728567..1728845)
Genome browser
AA seq
92 aa
AA seq
DB search
MTYKELKIQVSKNAQVPVEVADKVVEEVFHTLKSVMLRGDRLQVPGFGVFYTKIRSSRKV
KTHGEIKQLPSKRVPVFAPAKALKKEIESNTF
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacttacaaagaactaaagattcaggtttccaaaaacgcacaggttcctgttgaagtg
gcagacaaggtagttgaagaagtatttcataccttaaagagtgtaatgctccggggagat
agacttcaggttccgggttttggcgtgttctatacaaagatacgaagttcccgtaaagta
aaaactcacggagaaataaaacagcttccatctaaaagagtccctgtgtttgctccagca
aaagcattaaagaaagaaattgaatcaaatactttttaa
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