KEGG   Ectopseudomonas mendocina ymp: Pmen_0023
Entry
Pmen_0023         CDS       T00510                                 
Name
(GenBank) type III secretion outer membrane pore, YscC/HrcC family
  KO
K03219  type III secretion protein C
Organism
pmy  Ectopseudomonas mendocina ymp
Pathway
pmy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pmen_0023
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmy02044]
    Pmen_0023
Secretion system [BR:pmy02044]
 Type III secretion system
  Type III secretion core apparatus
   Pmen_0023
SSDB
Motif
Pfam: Secretin Secretin_N TraK_C
Other DBs
NCBI-ProteinID: ABP82798
UniProt: A4XN82
LinkDB
Position
complement(23528..25618)
AA seq 696 aa
MRNTLISLSWLLWLVSIPAHAVPPESWKQTAYAYDARQTDLNSALADFAREFGLSLDMPP
MDGIVDGRIRASNPQEFLERLGREYQFQWFVYNETLYISPTREQTSARIEVSPDAVDDLE
NALTAIGLLDPRFGWGTLPEEGLVLVRGPAQYVQFIREYSQKVEEPEKAEKQDVIVFTLK
YANAADRSIRYRDQELRVAGVASILRELLETRSRGEPISGVGIFQPSGTTQGLAPTRPMG
LPYAGMSGLDGGLLEQGLDNVLGLAQSSSRKRSESRSRSQIRVSADVRNNAVLIYDLPER
KAIYQGLIQQLDVPRNLIEIDAVILDIDRNELAELSSRWAFNSGSVSGGANLFEPGTTST
LFIQDAGRFAAELRALEGTGAASIMGNPSILTLENQPAVIDFSRTEYLTALAERVANIQP
ITAGTSLQVIPRSLNQGSRSQVQLIVDIEDGQIIESNISEEQPSVRRGNVSTQAVIAEHG
SLVIGGFHSLEANDRINKIPLLGDIPVIGKLLFQSRNREFNRRERLFILTPRLIGDQVNP
ARYVQHGNPHNLDRQLREIDERRRGTERPSRGDIEHAFTQLLDGIHPSGFDSAPLPLRAE
TLCNSDHGLTLDAERSQWFARDGWGVAVVVARNDTAQPIRIDESRCGGRWAMGVSAWPRA
WLQPGEESEVFIALRQPQSLQKTGQGRTSLLHRSTP
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgcgcaataccctgatatcgctgtcgtggttgttatggctcgtgtccataccggcgcac
gccgtgccacccgagagctggaaacagaccgcctatgcctacgatgcccggcaaaccgac
ctgaactcggcgttggcggacttcgcccgggagttcggtctatcgctggacatgccgccc
atggatggcatcgtcgacggtcgtatccgcgccagcaacccgcaggaatttctcgaacga
ctcgggcgtgaataccagttccaatggttcgtttacaacgaaacgctctacatcagcccc
acccgcgaacagacgtcggcccgcatcgaggtctcgccggatgccgtcgatgacctggaa
aacgcactgaccgccatcggcctgctcgacccgcgtttcggctggggcacgctacccgaa
gaaggcctggtgctggttcgcggcccggcccagtacgtacagttcattcgcgaatacagc
cagaaggtcgaagaaccggagaaagcggaaaaacaggacgtcatcgtcttcaccctgaag
tatgccaacgcggctgatcgctccattcgttatcgtgatcaggagctgcgtgtagcaggt
gtggccagcatccttcgcgaactgctggaaacccggtcacggggtgaacccatcagcggc
gtgggcattttccaaccatccggtacgacccaaggcctggcgccaacccgcccgatgggg
ttgccttacgctgggatgagcggcctggatggcggcctcctcgagcagggactcgacaat
gtactggggctggctcagtcctcttcgcgcaagcgcagtgaaagccgcagccgctcgcag
atccgcgtcagcgccgacgtgcgcaacaacgccgtcctgatctatgacctgccagagcgc
aaggccatctatcagggcctcatccagcaactggacgtgccgcgcaacctgatcgagatc
gatgccgtgattctcgatatcgaccgtaacgagctggccgaactgtccagccgctgggcc
ttcaactccggcagcgtcagcggcggcgccaacctgttcgaacccggtaccacgtcgacg
ctgttcatccaggatgccggtcggttcgccgcggaattgcgtgcactggagggaaccggg
gccgcctcgatcatgggcaacccctcgatcctgaccctggaaaaccagcccgcggtcatc
gacttcagccgcaccgagtacctgacggcgctggccgagcgcgttgccaatatccaaccc
atcaccgccggcaccagcctgcaggtgatcccgaggtcactgaatcagggcagccgctcc
caggtccagctgatcgtcgacatcgaagacggacagatcatcgagtcgaacatctccgag
gagcagccgtcggtacgccgtggcaatgtcagcacccaggcagtgatcgccgagcatggc
tcgctggtgatcggcggtttccacagtctcgaagccaacgacaggatcaacaagattccc
ttgctcggcgatatcccggtcatcggtaaattgctgttccagtcacgcaatcgcgaattc
aaccggcgtgagcgcttgttcatcctcacccctcgtctgatcggagatcaggtgaaccct
gcgcgctacgtgcaacatggcaatccgcataacctggaccggcaacttcgcgagatcgac
gagcgccgccggggtaccgaacgcccgagtcggggcgacatcgaacatgccttcacccag
ctgctcgatggcatacacccctccgggttcgacagcgcacccttgccgctcagggcagaa
acgctctgcaactcggatcacggactgacgctggatgccgaacgctcccagtggttcgcc
cgcgatggttggggtgtagcagtggtcgtggcacgtaacgacacggcacaaccgatacgc
atcgatgagagccgctgtgggggacgctgggccatgggggtcagtgcctggccacgcgcc
tggctccagcctggcgaggagagcgaagtgttcattgccctgcgccagccgcaatcgctg
caaaaaaccggacaaggccgaacttcattgctgcacaggagcaccccttga

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